TCONS_00069887-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00069887-protein
Unique Name	TCONS_00069887-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	519

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00069887-protein ID=TCONS_00069887-protein|Name=TCONS_00069887-protein|organism=Clytia hemisphaerica|type=polypeptide|length=519bp
MWWQILLTAFIVAFTAFYFYVRHRMTFWQRRGIPVDPGTFPFGSQHVWDF
FKQKIAFIQMTDHAYKNYPDAPVVGTYELFGRPSIVIRDLDIAKKVLVKD
FDQFMERKPASSNAYNPHTKNNRYLPVMLTELRGQQWKSVRASLTPVFTS
GKLKAMVPLIHKIADHCDIFLEKNVGKEIEAKELLRNYALDVIVSTGFGY
ESDSVNETNSIFKTNADLMVGKTMSIKIFLTFLMFLFFPSLLRKLDWPLL
DKKGEGFFVAAVRKAIKERQESGERRNDFIDTCLDILQKENEEIKTNEKS
EETKRQKDEIERIVIANSLIMLIAGVDTVSSTSSMMMYFLAKNQDCQEKL
YQEIKESIESTCSDQFDYAAIMNMPYMEKFFQESLRMYPVTHLERGSVND
YKIPGTEMVIPKDIVVRFPVTGIVKDEKYFSNPNVFDPENFSAEKKADRH
PFASGGFGHGPRNCIAQRFATMEVKIVVARMLSKYKVIPCSKTVDELIPD
PKSRSQFPKGDVWFSVEKR

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_043525	XLOC_043525	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00069887	TCONS_00069887	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002401	Cyt_P450_E_grp-I
IPR001128	Cyt_P450
IPR017972	Cyt_P450_CS

Vocabulary: **Molecular Function**
Term	Definition
GO:0005506	iron ion binding
GO:0020037	heme binding
GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
molecular_function	GO:0020037	heme binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 284..304
None	No IPR available	GENE3D	1.10.630.10		coord: 18..519 e-value: 6.9E-88 score: 294.8
IPR002401	Cytochrome P450, E-class, group I	PRINTS	PR00463	EP450I	coord: 92..113 score: 22.24 coord: 313..330 score: 27.2 coord: 454..464 score: 41.44 coord: 333..359 score: 22.6 coord: 419..443 score: 30.61 coord: 464..487 score: 21.3
IPR001128	Cytochrome P450	PRINTS	PR00385	P450	coord: 464..475 score: 36.34 coord: 455..464 score: 50.5 coord: 324..341 score: 35.79 coord: 379..390 score: 32.79
IPR001128	Cytochrome P450	PFAM	PF00067	p450	coord: 76..501 e-value: 2.0E-80 score: 270.7
IPR001128	Cytochrome P450	SUPERFAMILY	48264	Cytochrome P450	coord: 23..519
IPR017972	Cytochrome P450, conserved site	PROSITE	PS00086	CYTOCHROME_P450	coord: 457..466

Blast

[Close]

BLAST of TCONS_00069887-protein vs. Swiss-Prot (Human)
Match: CP3A4 (Cytochrome P450 3A4 OS=Homo sapiens GN=CYP3A4 PE=1 SV=4)

HSP 1 Score: 212.231 bits (539), Expect = 2.015e-62
Identity = 146/479 (30.48%), Postives = 235/479 (49.06%), Query Frame = 0

Query:   20 YVRHRMTFWQRRGIPVDPGTFPFGSQHVWDFFKQKIAFIQMTDHAYKNYPDAPVVGTYELFGRPSIVIRDLDIAKKVLVKD-FDQFMERKPASSNAYNPHTKNNRYLPVMLTELRGQQWKSVRASLTPVFTSGKLKAMVPLIHKIADHC--DIFLEKNVGKEIEAKELLRNYALDVIVSTGFGYESDSVNETNSIFKTNADLMVGKTMSIKIFLTFLMFLFFPSLLRKLDWPLLDKKGEGFFVAAVRKAIKERQESGER-RNDFIDTCLDILQKENEEIKTNEKSEETKRQKDEIERIVIANSLIMLIAGVDTVSSTSSMMMYFLAKNQDCQEKLYQEIKESIESTCSDQFDYAAIMNMPYMEKFFQESLRMYPVT-HLERGSVNDYKIPGTEMVIPKDIVVRFPVTGIVKDEKYFSNPNVFDPENFSAEKKADRHPFASGGFGHGPRNCIAQRFATMEVKIVVARMLSKYKVIPCSKT 493
            Y  H    +++ GIP  P   PF    + +       F       +K Y    V G Y+   +P + I D D+ K VLVK+ +  F  R+P     +         +   ++    ++WK +R+ L+P FTSGKLK MVP+I +  D    ++  E   GK +  K++   Y++DVI ST FG   DS+N     F  N   ++        FL+  +F F   +L  L+  +  ++   F   +V++  + R E  ++ R DF+   +D           ++ S+ET+  K   +  ++A S+I + AG +T SS  S +MY LA + D Q+KL +EI   + +     +D   ++ M Y++    E+LR++P+   LER    D +I G  M IPK +VV  P   + +D KY++ P  F PE FS + K +  P+    FG GPRNCI  RFA M +K+ + R+L  +   PC +T
Sbjct:   25 YGTHSHGLFKKLGIP-GPTPLPF----LGNILSYHKGFCMFDMECHKKY--GKVWGFYD-GQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVGF---------MKSAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMID-----------SQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYD--TVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEING--MFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKET 471

The following BLAST results are available for this feature:

BLAST of TCONS_00069887-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00069887-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CP3A4	2.015e-62	30.48	Cytochrome P450 3A4 OS=Homo sapiens GN=CYP3A4 PE=1...	[more]

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TCONS_00069887-protein (polypeptide) - C. hemisphaerica