TCONS_00069873-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00069873-protein
Unique NameTCONS_00069873-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length578

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00069873-protein ID=TCONS_00069873-protein|Name=TCONS_00069873-protein|organism=Clytia hemisphaerica|type=polypeptide|length=578bp
MNARYQACLTLLQRKHIKAQKDWLEACIEWILEENGAGTSNSTFANLVYE
QWLMADLREISEPIFPSNIKKLKGNLNGHFCVQVLSVIDIGYSAYSQLQK
HKGQELDYDDGDEEEENEAKDFFKKSSDGAPKTANNKGKWKETQSRMLLI
ELNDGAQTIEGIEYSSINHLKIENIEPGCKLHLSGPIQCRNSMLLLKSEN
IQLLGGNVESLMETKSQIDLLSGILNVEVNKDAIKTTNITVKKENVKKPV
NNNPTKSVADNQKTKQNLQPKKNIHSASTIRKQIPVKKEPPKDDYFNDLD
DDFMKELNEDFSNDVADDIIFQEMDIKSEQKSHSSIIKNKTSTSSATTNS
KSNQNIRTNEDRDDDMEDFFKNNEDDLFDENEDDFFNNDNHFFEEEQNVF
ETLQNKEKEKMTKLKRPSEYVEPQPKKEICSNKQQPPKRSPQSDIQPPLQ
KQHMKKSIPQMVAGDNPISVPFIFEGQFKTLASKLSFDNHYELFAILSDG
VNFIKILLSDLALNSLIGYTATRVQEAVANKLCNVEKEAIKKALKGAEKA
LEMNKWTMTIQFNKNENIYEVINMKPII
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043520XLOC_043520Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00069873TCONS_00069873Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033472DUF1767
IPR032199RMI1_C
IPR013894RMI1_N
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0000166 nucleotide binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033472RecQ mediated genome instability protein, DUF1767SMARTSM01161DUF1767_2coord: 9..99
e-value: 2.9E-30
score: 116.6
IPR032199Recq-mediated genome instability protein 1, C-terminal OB-fold domainPFAMPF16099RMI1_Ccoord: 475..576
e-value: 2.3E-10
score: 40.4
IPR013894RecQ mediated genome instability protein, N-terminalPFAMPF08585RMI1_Ncoord: 12..217
e-value: 6.8E-53
score: 179.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 406..456
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 247..294
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 328..370

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00069873-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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