TCONS_00069792-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00069792-protein
Unique NameTCONS_00069792-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length433

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00069792-protein ID=TCONS_00069792-protein|Name=TCONS_00069792-protein|organism=Clytia hemisphaerica|type=polypeptide|length=433bp
MEKSPNNPPRVILSSEEKATISKSVLLEKWERQEEYIDHLLSKSGDNSNE
KLKLQQQEATRRENVLLMRLATKEQEMQELLSQIQELKEKQAPSTAQLQS
MLIDPAVNLLFEKMKTELTETKDRLEQAQNDLSAWKFTPDSTTGKKLMGK
CRMLIQENQELGKQLSQGRIAQLEAELALQKKYSDELKESQDEMNDFVIQ
LDEEVEGMQATICALQDELKTTKTRCSELEQENYKDLQNGCERDLNEQND
LLSHKPLNEEEHYVNRTTRVKCEMDDMDDQMNDDEKRAIPPPPLLTDKNG
RAEEEKERTVHSNGDSNMTDESEELPMETEPNIMHALKASTNIHSEELSS
QHHDNDEHAARPNHVTVIRGTDDNFISPTKGLTKTSFSINDLLAPGTEDL
RKDADVSMEIGGPENGVVSTASVLNGDIDDDAI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043458XLOC_043458Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00069792TCONS_00069792Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029732WTAP/Mum2
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0080009mRNA methylation
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0080009 mRNA methylation
cellular_component GO:0005634 nucleus
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 170..193
NoneNo IPR availableCOILSCoilCoilcoord: 111..131
NoneNo IPR availableCOILSCoilCoilcoord: 70..90
NoneNo IPR availableGENE3D1.20.120.330coord: 150..313
e-value: 4.3E-5
score: 22.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 280..323
IPR029732WTAP/Mum2 familyPFAMPF17098Wtapcoord: 58..212
e-value: 6.0E-60
score: 201.6

Blast
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BLAST of TCONS_00069792-protein vs. Swiss-Prot (Human)
Match: FL2D (Pre-mRNA-splicing regulator WTAP OS=Homo sapiens GN=WTAP PE=1 SV=2)

HSP 1 Score: 291.582 bits (745), Expect = 3.121e-95
Identity = 149/226 (65.93%), Postives = 178/226 (78.76%), Query Frame = 0 
Query:    8 PPRVILSSEEKATISKSVLLEKWERQEEYIDHLLSKSGD-NSN---------EKLKLQQQEATRRENVLLMRLATKEQEMQELLSQIQELKEKQAPSTAQLQSMLIDPAVNLLFEKMKTELTETKDRLEQAQNDLSAWKFTPDSTTGKKLMGKCRMLIQENQELGKQLSQGRIAQLEAELALQKKYSDELKESQDEMNDFVIQLDEEVEGMQATICALQDELKTTK 223
            P +V LS  +   +++  L+ +W++ E Y+  L  K  D NSN         EKLK QQQE+ RREN+L+MRLATKEQEMQE  +QIQ LK+ Q PS AQL+S ++DPA+NL F KMK EL +TKD+LEQAQN+LSAWKFTPDS TGKKLM KCRMLIQENQELG+QLSQGRIAQLEAELALQKKYS+ELK SQDE+NDF+IQLDEEVEGMQ+TI  LQ +LK T+
Sbjct:    8 PKKVRLSETDFKVMARDELILRWKQYEAYVQALEGKYTDLNSNDVTGLRESEEKLKQQQQESARRENILVMRLATKEQEMQECTTQIQYLKQVQQPSVAQLRSTMVDPAINLFFLKMKGELEQTKDKLEQAQNELSAWKFTPDSQTGKKLMAKCRMLIQENQELGRQLSQGRIAQLEAELALQKKYSEELKSSQDELNDFIIQLDEEVEGMQSTILVLQQQLKETR 233
The following BLAST results are available for this feature:
BLAST of TCONS_00069792-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FL2D3.121e-9565.93Pre-mRNA-splicing regulator WTAP OS=Homo sapiens G... [more]
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