TCONS_00069483-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00069483-protein
Unique NameTCONS_00069483-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length410

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00069483-protein ID=TCONS_00069483-protein|Name=TCONS_00069483-protein|organism=Clytia hemisphaerica|type=polypeptide|length=410bp
METSIKTSVYNWTTASPYSTYASILLQNSSANMTNLTNQNRQLQGSCESV
GDIQVEMILYCIFIAIIMLSSVVGNLLTVLSIIMSRSLKKRVTFYFIASL
ACSDFCFAVFLLPFRITTRLNGNRFCHAVPACYVMIISDAIVNVASILNL
LLIALDRFIAIKFPFIYTERMTGRAAKRMIAGVWSFAMLWSFLGIFRWDN
NGSMISITTKPVCANVNYNFYAASSFGIYITVLIIITSSYITILMVALKQ
IKAIEATSVTVVLLNPNNNGSPGTTDKNKKRRRRRLNRELRATKSVAIVF
LAYVICWLPLYVINVIIQIDSNYFLKLDKGVFLFIYYAFVEILPAVNTMI
NPFIYSFSNKQFRDAFKRIISKTLGLRLNLMGQDDFCSLDMSSLPNSPSV
SRMGSSMKKV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043307XLOC_043307Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00069483TCONS_00069483Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000276GPCR_Rhodpsn
IPR017452GPCR_Rhodpsn_7TM
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
Vocabulary: Molecular Function
TermDefinition
GO:0004930G-protein coupled receptor activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007186 G-protein coupled receptor signaling pathway
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004930 G-protein coupled receptor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 26..46
NoneNo IPR availableGENE3D1.20.1070.10coord: 20..374
e-value: 1.2E-64
score: 217.6
NoneNo IPR availableSUPERFAMILY81321Family A G protein-coupled receptor-likecoord: 30..375
IPR000276G protein-coupled receptor, rhodopsin-likePRINTSPR00237GPCRRHODOPSNcoord: 59..83
score: 24.01
coord: 139..161
score: 34.15
coord: 93..114
score: 31.41
coord: 292..316
score: 26.69
coord: 175..196
score: 24.39
coord: 337..363
score: 32.04
IPR000276G protein-coupled receptor, rhodopsin-likeSMARTSM013817TM_GPCR_Srsx_2coord: 68..370
e-value: 0.0014
score: -56.6
IPR000276G protein-coupled receptor, rhodopsin-likePFAMPF000017tm_1coord: 74..355
e-value: 3.0E-40
score: 138.0
IPR000276G protein-coupled receptor, rhodopsin-likePROSITEPS00237G_PROTEIN_RECEP_F1_1coord: 145..161
IPR017452GPCR, rhodopsin-like, 7TMPROSITEPS50262G_PROTEIN_RECEP_F1_2coord: 74..355
score: 38.386

Blast
[Close]
BLAST of TCONS_00069483-protein vs. Swiss-Prot (Human)
Match: DRD1 (D(1A) dopamine receptor OS=Homo sapiens GN=DRD1 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.245e-33
Identity = 102/345 (29.57%), Postives = 175/345 (50.72%), Query Frame = 0 
Query:   52 DIQVEMILYCIFIAIIMLSSVVGNLLTVLSIIMSRSLKKRVTFYFIASLACSDFCFAVFLLPFRITTRLNGNRFCHAVPACYVMIISDAIVNVASILNLLLIALDRFIAIKFPFIYTERMTGRAAKRMIAGVWSFAMLWSFLGI-FRW---------DNNGSMISITTKPVCANVNYNFYAASS-FGIYITVLIIITSSYITILMVALKQIKAIEATSVTVV----LLNPNNNGSPGTTDKNKKRRRRRLNRELRATKSVAIVFLAYVICWLPLYVINVIIQ-----------IDSNYFLKLDKGVFLFIYYAFVEILPAVNTMINPFIYSFSNKQFRDAFKRII 370
            D  V ++  C F+++++LS+++GN L   ++I  R L+ +VT +F+ SLA SD   AV ++P++    + G  F      C + +  D + + ASILNL +I++DR+ AI  PF Y  +MT +AA  +I+  W+ ++L SF+ +   W         D N + ++ T     ++++  +  +SS    YI V I+I  +Y  I  +A KQI+ I A     V          NG P    + +   +    RE +  K+++++   +V CWLP +++N I+            IDSN F      VF++  +A        N+ +NP IY+F N  FR AF  ++
Sbjct:   19 DFSVRILTAC-FLSLLILSTLLGNTLVCAAVIRFRHLRSKVTNFFVISLAVSDLLVAVLVMPWKAVAEIAG--FWPFGSFCNIWVAFDIMCSTASILNLCVISVDRYWAISSPFRYERKMTPKAAFILISVAWTLSVLISFIPVQLSWHKAKPTSPSDGNATSLAETIDNCDSSLSRTYAISSSVISFYIPVAIMIV-TYTRIYRIAQKQIRRIAALERAAVHAKNCQTTTGNGKPVECSQPESSFKMSFKRETKVLKTLSVIMGVFVCCWLPFFILNCILPFCGSGETQPFCIDSNTF-----DVFVWFGWA--------NSSLNPIIYAF-NADFRKAFSTLL 345
The following BLAST results are available for this feature:
BLAST of TCONS_00069483-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DRD13.245e-3329.57D(1A) dopamine receptor OS=Homo sapiens GN=DRD1 PE... [more]
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