TCONS_00069235-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00069235-protein
Unique NameTCONS_00069235-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length738

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00069235-protein ID=TCONS_00069235-protein|Name=TCONS_00069235-protein|organism=Clytia hemisphaerica|type=polypeptide|length=738bp
MKMVYLTLGTTGLTPRELLVRAESSTVFSASWKPPMNFDHTKEHKYKTSW
VGPTGMPHTFFTSKTHIRVDGFGVYGGYDFLLTVCFTYMPADEQASDCIY
GQILMPEGIPTQGPYLKEYTRRWGKRNEFELTWEPLSKEHSMGKIIKYNI
YAQKFFADYRSPVEKIEVPGGDNSNAAIHLKKGSYKVWITGVTSKGEGPK
SDELTIYTEDYHHETNMLQVQTEWSKTQQDQATISWKLRIKATETAYKIL
YVPIPYNDYWREVTDTQVDGRISSIKINNLDPKLKYRFTVLCLREVERYP
RDDIIDGQSSNAYLMPRGVAQSTNSSRLDVPAPKNLRCTSDKEQEIKLTW
DTVPSAPNTKVVLGYRVHLLEEIKGSMGSFETRQSSLVLTNLTKGFWYGV
QLTAYGQHQGRYLKSEFLSCRTKTKAPSKPRDVEYDFIYDNLDDTSYLRL
RWKPPLFTGGSVFSYQIVHETDEAIETLVNFPFPVYERNVILNRQDDEYI
HYEGIWTQQTRKLSLKQIFTIVAINDYGRGEAYTNTTHGVFYSKLHKADK
PTSNQSPSQKPFLEEDNRMGILAGLSISLFFLLLFIVICVVKEPCKKINT
GLPHHTASSNTGGDFEYQQRLLVNHSSNQSNGTTTSEENSDESRLQRNKK
NNGWKFFQKFHRPKLPGRRSYGKKDFSDSGIRVSYSSGSSASRIGNLQQN
NCPPRCASTCSVLESYNDRRIPTEDARISFLPPSSRLF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043149XLOC_043149Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00069235TCONS_00069235Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003961FN3_dom
IPR013783Ig-like_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003961Fibronectin type IIISMARTSM00060FN3_2coord: 330..410
e-value: 0.024
score: 23.8
coord: 217..300
e-value: 48.0
score: 5.6
coord: 12..198
e-value: 45.0
score: 5.8
coord: 427..530
e-value: 190.0
score: 0.4
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 14..107
score: 6.833
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 216..312
score: 9.286
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 110..211
score: 10.754
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 332..427
score: 10.478
IPR003961Fibronectin type IIICDDcd00063FN3coord: 331..422
e-value: 1.12569E-4
score: 40.1723
IPR003961Fibronectin type IIICDDcd00063FN3coord: 223..290
e-value: 0.00434595
score: 35.1647
IPR003961Fibronectin type IIICDDcd00063FN3coord: 127..208
e-value: 1.55207E-5
score: 42.8687
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 15..209
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 332..531
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 225..296
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 218..311
e-value: 4.6E-5
score: 23.1
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 328..421
e-value: 2.8E-11
score: 43.0
coord: 11..98
e-value: 0.22
score: 11.3
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 422..540
e-value: 1.2E-5
score: 24.9
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 119..217
e-value: 1.2E-6
score: 28.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 626..648

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00069235-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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