TCONS_00069008-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00069008-protein
Unique Name	TCONS_00069008-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	110

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00069008-protein ID=TCONS_00069008-protein|Name=TCONS_00069008-protein|organism=Clytia hemisphaerica|type=polypeptide|length=110bp
MVQEFQSPDSDDCHGLGFIKPPKKMPCCGPKLSNCCFVLSIWGMIMLAIM
GILFRVQSVALIEDIPKGGTEEEGFQTASTNCFIAAGLYVGVFIFTSYQK
YAISRGYSRL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_042998	XLOC_042998	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00069008	TCONS_00069008	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR022559	DUF2650

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022559	Protein of unknown function DUF2650	PFAM	PF10853	DUF2650	coord: 27..52 e-value: 2.9E-6 score: 26.8

Blast

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BLAST of TCONS_00069008-protein vs. Swiss-Prot (Human)
Match: RNK (Ribonuclease kappa OS=Homo sapiens GN=RNASEK PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 2.567e-17
Identity = 36/72 (50.00%), Postives = 45/72 (62.50%), Query Frame = 0

Query:   27 CCGPKLSNCCFVLSIWGMIMLAIMGILFRVQSVALIEDIPKGGTEEEG--------FQTASTNCFIAAGLYV 90
            CCGPKL+ C  VLS WG+IML ++GI F V S  LIED+P    + E         ++  S NCFIAAGLY+
Sbjct:   45 CCGPKLAACGIVLSAWGVIMLIMLGIFFNVHSAVLIEDVPFTEKDFENGPQNIYNLYEQVSYNCFIAAGLYL 116

The following BLAST results are available for this feature:

BLAST of TCONS_00069008-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00069008-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
RNK	2.567e-17	50.00	Ribonuclease kappa OS=Homo sapiens GN=RNASEK PE=2 ...	[more]

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TCONS_00069008-protein (polypeptide) - C. hemisphaerica