TCONS_00068901-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00068901-protein
Unique NameTCONS_00068901-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length257

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00068901-protein ID=TCONS_00068901-protein|Name=TCONS_00068901-protein|organism=Clytia hemisphaerica|type=polypeptide|length=257bp
MVVYLKTPILFSSILRTCTFTTLRRMATINDKMEGMRQSYEVESSISEDL
TVKDPMELFKVWFQKAAEHPDILEPNAMTIATCSKDGYPTSRYVLLKGLT
EKGFRFFTNYESQKGKQLIENPKASLTFYWEPMHMQVRICGDVEKLPEED
STSYFHKRPRESQIGAVVSRQSQPIPNRKYLEDLREDIIKKYEGKEIPKP
TYWGGFVITPVTMEFWCGGVGRLHDRIRFRIPALSETINSDLTKEGANGW
VYERLSP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042929XLOC_042929Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00068901TCONS_00068901Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011576Pyridox_Oxase_put
IPR000659Pyridox_Oxase
IPR012349Split_barrel_FMN-bd
IPR019576Pyridoxamine_oxidase_dimer_C
IPR019740Pyridox_Oxase_CS
Vocabulary: Molecular Function
TermDefinition
GO:0004733pyridoxamine-phosphate oxidase activity
GO:0010181FMN binding
GO:0048037cofactor binding
GO:0016638oxidoreductase activity, acting on the CH-NH2 group of donors
Vocabulary: Biological Process
TermDefinition
GO:0008615pyridoxine biosynthetic process
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0008615 pyridoxine biosynthetic process
molecular_function GO:0048037 cofactor binding
molecular_function GO:0010181 FMN binding
molecular_function GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors
molecular_function GO:0004733 pyridoxamine-phosphate oxidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011576Pyridoxamine 5'-phosphate oxidase, putativePFAMPF01243Putative_PNPOxcoord: 72..149
e-value: 8.5E-24
score: 83.5
IPR000659Pyridoxamine 5'-phosphate oxidaseTIGRFAMTIGR00558TIGR00558coord: 32..231
e-value: 1.1E-71
score: 238.8
IPR000659Pyridoxamine 5'-phosphate oxidasePIRSFPIRSF000190Pyd_amn-ph_oxdcoord: 25..257
e-value: 1.2E-75
score: 251.7
IPR000659Pyridoxamine 5'-phosphate oxidaseHAMAPMF_01629PdxHcoord: 39..257
score: 35.811
IPR012349FMN-binding split barrelGENE3D2.30.110.10coord: 40..257
e-value: 4.1E-67
score: 225.2
IPR012349FMN-binding split barrelSUPERFAMILY50475FMN-binding split barrelcoord: 50..257
IPR019576Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminalPFAMPF10590PNP_phzG_Ccoord: 203..257
e-value: 2.1E-15
score: 56.4
IPR019740Pyridoxamine 5'-phosphate oxidase, conserved sitePROSITEPS01064PYRIDOX_OXIDASEcoord: 213..226

Blast
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BLAST of TCONS_00068901-protein vs. Swiss-Prot (Human)
Match: PNPO (Pyridoxine-5'-phosphate oxidase OS=Homo sapiens GN=PNPO PE=1 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.627e-79
Identity = 117/226 (51.77%), Postives = 157/226 (69.47%), Query Frame = 0 
Query:   36 MRQSYEVESSISED--LTVKDPMELFKVWFQKAAEHPDILEPNAMTIATCSKDGYPTSRYVLLKGLTEKGFRFFTNYESQKGKQLIENPKASLTFYWEPMHMQVRICGDVEKLPEEDSTSYFHKRPRESQIGAVVSRQSQPIPNRKYLEDLREDIIKKYEGKEIPKPTYWGGFVITPVTMEFWCGGVGRLHDRIRFR--IPALSETINSDLTKEGANGWVYERLSP 257
            MR+SY  +    E+  LT  DP++ F  WF++A + PDI E NAM +ATC++DG P++R +LLKG  + GFRFFTN+ES+KGK+L  NP ASL FYWEP++ QVR+ G V+KLPEE++  YFH RP+ SQIGAVVS QS  IP+R+YL    E++ + Y+ +E+PKP  WGG+V+ P  MEFW G   RLHDRI FR  +P     +   +T  G   W+YERL+P
Sbjct:   37 MRKSYRGDREAFEETHLTSLDPVKQFAAWFEEAVQCPDIGEANAMCLATCTRDGKPSARMLLLKGFGKDGFRFFTNFESRKGKELDSNPFASLVFYWEPLNRQVRVEGPVKKLPEEEAECYFHSRPKSSQIGAVVSHQSSVIPDREYLRKKNEELEQLYQDQEVPKPKSWGGYVLYPQVMEFWQGQTNRLHDRIVFRRGLPTGDSPLGP-MTHRGEEDWLYERLAP 261
The following BLAST results are available for this feature:
BLAST of TCONS_00068901-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PNPO1.627e-7951.77Pyridoxine-5'-phosphate oxidase OS=Homo sapiens GN... [more]
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