TCONS_00068881-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00068881-protein
Unique Name	TCONS_00068881-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	970

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00068881-protein ID=TCONS_00068881-protein|Name=TCONS_00068881-protein|organism=Clytia hemisphaerica|type=polypeptide|length=970bp
MSEPESSSNKTEVGIPSSAIWIGLSFFLFFATFGIFGTISLLIYILLFIA
GFSLVIWNWSVEKSSEILSSEDQPLLDHEDKYCGIPAVFKNIEKAPQGFK
YDKRMTGSSCIDEVLQEVIQYFFRDYINYWYYSISDDERFLYELRQVIQK
CIIGFASRTKEVEWVPFLTTRMVDEVASHLRIYRKTRSRLDERKEQPNYN
SHLTADEAKVQNEIDLESLFFEVESEVVKGVTRRTICLDGEGEQQYLQDI
SEVLLYLLLPAEDFQNKTVRFFLREIIATSVLLPTVNMICDPDYVNQTIS
WLCAKETTFTAETFLTTIRFCDDIDDLEETKRKVDIEIAKLRSHDSHGSE
SNQSEASMKKNMNSLMYVRKLCITTIRSLKSGSANLGDQMMSMENEADPN
LMELLSPHQNIPKLSLKEILEDNTALSYFIEYMGSYNAEHYIFFHLTVEG
FRATAIQQLTLLAEETAKAQDKKLANPNSENFEQLKQAALNIYEEYISPK
ASPRIVLDDGMVRKIIKDIKSNEPSGAYFDAAHMAVYKILEGPKYYGAFL
SSTSYLKCLFDLDMLNSKDDEGASDDDTSSTISTTSVRSTLYEEETTNQP
WTPDCDLRYSALIGQAGVVTMYGKSYVNYTVHVCRTTGEGSRNWIIMRRY
SDFHDLHLQLIERYQSLGTWLHLPGKKTFGNMEQEFIEKRRDQLENYIQP
LLDTQLLAEHSGMFELVAGFLEQGDYFKGKSEISRRVDHLVKPMKVSLSN
VGRAVKNKADSVSKWSGDLTDSFKSKEKFSEKDVSGKLSEALVADTNENI
PLRILLLLMDEVFDLQDRNQWLRRRIVVILRQIIKAIFGDGINRKIVEHV
DFSTSSQQIAEYVKQFRDSYWPGGVLAEENPERPSDAKRRLRMVTKAKML
GSIPDELKRFLGTENVREGVSRVFDMFQHVNLNRRLFYVLFEAFLDTTFA
DNKFNEIFKKIHETNSKKSS

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_042926	XLOC_042926	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00068881	TCONS_00068881	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR016137	RGS
IPR003114	Phox_assoc
IPR001683	Phox
IPR013937	Sorting_nexin_C

Vocabulary: **Molecular Function**
Term	Definition
GO:0035091	phosphatidylinositol binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0035091	phosphatidylinositol binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 324..344
None	No IPR available	GENE3D	1.10.167.10		coord: 438..542 e-value: 9.7E-11 score: 41.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 570..599
IPR016137	RGS domain	SMART	SM00315	RGS_3	coord: 415..559 e-value: 1.2E-18 score: 77.9
IPR016137	RGS domain	PFAM	PF00615	RGS	coord: 415..557 e-value: 5.7E-16 score: 58.7
IPR016137	RGS domain	PROSITE	PS50132	RGS	coord: 415..545 score: 14.18
IPR016137	RGS domain	SUPERFAMILY	48097	Regulator of G-protein signaling, RGS	coord: 412..562
IPR003114	Phox-associated domain	SMART	SM00313	PXA_3	coord: 108..307 e-value: 2.8E-37 score: 139.8
IPR003114	Phox-associated domain	PFAM	PF02194	PXA	coord: 111..302 e-value: 1.1E-44 score: 152.1
IPR003114	Phox-associated domain	PROSITE	PS51207	PXA	coord: 108..307 score: 53.89
IPR001683	Phox homologous domain	SMART	SM00312	PX_2	coord: 611..724 e-value: 2.1E-12 score: 57.2
IPR001683	Phox homologous domain	GENE3D	3.30.1520.10		coord: 607..736 e-value: 1.7E-23 score: 82.3
IPR001683	Phox homologous domain	PFAM	PF00787	PX	coord: 622..711 e-value: 3.8E-17 score: 62.2
IPR001683	Phox homologous domain	PROSITE	PS50195	PX	coord: 607..727 score: 15.901
IPR001683	Phox homologous domain	SUPERFAMILY	64268	PX domain	coord: 618..712
IPR013937	Sorting nexin, C-terminal	PFAM	PF08628	Nexin_C	coord: 821..929 e-value: 2.9E-26 score: 92.2

Blast

[Close]

BLAST of TCONS_00068881-protein vs. Swiss-Prot (Human)
Match: SNX13 (Sorting nexin-13 OS=Homo sapiens GN=SNX13 PE=1 SV=4)

HSP 1 Score: 663.3 bits (1710), Expect = 0.000e+0
Identity = 370/980 (37.76%), Postives = 565/980 (57.65%), Query Frame = 0

Query:   21 WIGLSFFLFFATFGIFGTISLLIYILLFIAGFSLVIWNWSVEKSSEILSSEDQPLLDHEDKYCGIPAVFKNIEKAPQGFKYDKRMTGSSCIDEVLQEVIQYFFRDYINYWYYSISDDERFLYELRQVIQKCIIGFASRTKEVEWVPFLTTRMVDEVASHLRIYRKTRSRLDERKEQPNYNSHLTADEAKVQNEIDLESLFFEVESEVVKGVTRRTICLDGEGEQQYLQDISEVLLYLLLPAEDFQNKTVRFFLREIIATSVLLPTVNMICDPDYVNQTISWLCAKETTFTAETFLTTIRFCDDIDDLEETKRKVDIEIAKLRSHDSHGSESNQSEASMKKNMNSLMYVRKLCITTIRSLKSGSANLGDQMMSMENEADPNLMELLSPHQNIPKLSLKEILEDNTALSYFIEYMGSYNAEHYIFFHLTVEGFRATAIQQLTLLAEETAKAQDKKLANPNSENFEQLKQAALNIYEEYISPKASPRIVLDDGMVRKIIKDIKSNEPSGAYFDAAHMAVYKI-LEGPKYYGAFLSSTSYLKCLFDLDMLNSKDDEGASD------------------DDTSSTISTTSVRSTLYEEETTNQPWTPDCDLRYSALIGQAGVVTMYGKSYVNYTVHVCRTTGEGSRNWIIMRRYSDFHDLHLQLIERYQSLGTWLHLPGKKTFGNMEQEFIEKRRDQLENYIQPLLDTQLLAEHSGMFELVAGFLEQGDYFKGKSEISRRVDHLVKPMKVSLSNVGRAVKNKADSVSKWSGDLTDSFKSKEKFSEKDVSG-------------------KLSEALVADTNENIPLRILLLLMDEVFDLQDRNQWLRRRIVVILRQIIKAIFGDGINRKIVEHVDFSTSSQQIAEYVKQFRDSYWPGGVLAEENPERPSDAKRRLRMVTKAKMLGSIPDELKRFLGTENVREGVSRVFDMFQHVNLNRRLFYVLFEAFLDTTFADNKFNEIFKKIH 962
            W  L   LF  TFG F    L  YIL F+ G  +V   +    S + L   +   L       G+P   + +++  +  K D+R+TG++ IDE LQ+VIQ+  RDY+ YWYY++SDDE FL E+RQ +Q  +I FA+R+KE++W P+ TTR+VD+  +HLR++RK + ++ E+ +Q    +             DL   FFEVE E+ K V R  +C   + E+ +L+D+ EVLLYLLLP  DFQNK +R+F+REI+A  +LLP +N + DPDY+NQ + W+  +++    E F+  I+  D+I +LE  + K   E+  LRS D+ G + N    ++K  +NSL++V+K+C + I+ L+SG               + N ++L +    +  + L  IL DN AL +F++YM     + ++FF +TVEG+R TA QQL +L    ++ +D K     ++    L+ AA+ IYE+Y+S KASPR+ +DD +V K+   +   +P+   FD     VY++ L   ++Y +F  +  Y++ L +LDML      G+ D                  DD S+  S  SV+   Y  +T    + P     Y+     AGV   +GK+Y  Y + V R        W   RRYSDFHD H+++ E+++SL + L LPGKKTF NM+++F+EKR+  L  Y+Q LL  +++     +   V  FLE   Y KGK + +R++D  V P++ S+ NV  AVK+  DS+++    ++D+     +   +D+                     ++S  L  + ++NIPLR++LLLMDEVFDL++RNQWLRR I  +L+Q+I+A +GD INRKIV+HVD+ TS +Q+A+ VK+FRD++WP G+LAE  P R    + R R+  K K+L  +PDELK  +G E  R+G+ RVF+MFQH  LNRR+ YV  E FL+T F   KF E+F K+H
Sbjct:   12 WGSLGIVLFLITFGPFVIFYLTFYILCFVGGGLVVTLLFGKTNSEKYLEQCEHSFLPPTSP--GVPKCLEEMKREARTIKIDRRLTGANIIDEPLQQVIQFSLRDYVQYWYYTLSDDESFLLEIRQTLQNALIQFATRSKEIDWQPYFTTRIVDDFGTHLRVFRKAQQKITEKDDQVKGTAE------------DLVDTFFEVEVEMEKEVCRDLVCTSPKDEEGFLRDLCEVLLYLLLPPGDFQNKIMRYFVREILARGILLPLINQLSDPDYINQYVIWMI-RDSNCNYEAFMNIIKLSDNIGELEAVRDKAAEELQYLRSLDTAGDDIN----TIKNQINSLLFVKKVCDSRIQRLQSGK--------------EINTVKLAANFGKLCTVPLDSILVDNVALQFFMDYMQQTGGQAHLFFWMTVEGYRVTAQQQLEVL---LSRQRDGKHQTNQTKGL--LRAAAVGIYEQYLSEKASPRVTVDDYLVAKLADTLNHEDPTPEIFDDIQRKVYELMLRDERFYPSFRQNALYVRMLAELDMLKDPSFRGSDDGDGESFNGSPTGSINLSLDDLSNVSSDDSVQLHAYISDTVYADYDP-----YAV----AGVCNDHGKTYALYAITVHRRNLNSEEMWKTYRRYSDFHDFHMRITEQFESLSSILKLPGKKTFNNMDRDFLEKRKKDLNAYLQLLLAPEMMKASPALAHYVYDFLENKAYSKGKGDFARKMDTFVNPLRNSMRNVSNAVKSLPDSLAEGMTKMSDNMGKMSERLGQDIKQSFFKVPPLIPKTDSDPEHRRVSAQLDDNVDDNIPLRVMLLLMDEVFDLKERNQWLRRNIKNLLQQLIRATYGDTINRKIVDHVDWMTSPEQVADSVKRFRDAFWPNGILAEAVPCRDKSIRMRTRVAGKTKLLAIMPDELKHIIGAETTRKGILRVFEMFQHNQLNRRMVYVFLEGFLETLFPQYKFRELFNKLH 944

The following BLAST results are available for this feature:

BLAST of TCONS_00068881-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00068881-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
SNX13	0.000e+0	37.76	Sorting nexin-13 OS=Homo sapiens GN=SNX13 PE=1 SV=...	[more]

You are here

TCONS_00068881-protein (polypeptide) - C. hemisphaerica