TCONS_00068879-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00068879-protein
Unique NameTCONS_00068879-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length288

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00068879-protein ID=TCONS_00068879-protein|Name=TCONS_00068879-protein|organism=Clytia hemisphaerica|type=polypeptide|length=288bp
MKQTIAIILLVAVCLAHAKKVEKPASTETKDSKSKPASKRQMCAGMCSPN
CAPACSAQCCAAPPPMPVAMPCAAPPCAAPMPAPCAAPPCAAPMPAPCAA
PPCAAPMPAPCAAPPCAAAMYAPCAAPPCAPPMPAPCAAPPCPAPCAAPP
CAAPMAAPCAAPPCAAPMMMAAPCGGAAPCGAMGPCGAQGATGAVGVPGP
MGPAGPMGMGGPQGPMGPCGPQGPAGAPGAPARPCAPICLHWMAIISQQP
TASCPQACQQTGCCRPPVQMAAPMPACMPSCAPSCCGR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042925XLOC_042925Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00068879TCONS_00068879Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008160Collagen
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00021PRORICHcoord: 128..137
score: 44.17
coord: 252..260
score: 31.48
coord: 64..76
score: 33.01
coord: 271..280
score: 27.08
coord: 140..146
score: 59.52
IPR008160Collagen triple helix repeatPFAMPF01391Collagencoord: 181..232
e-value: 8.2E-7
score: 28.6

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00068879-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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