TCONS_00068771-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00068771-protein
Unique NameTCONS_00068771-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length466

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00068771-protein ID=TCONS_00068771-protein|Name=TCONS_00068771-protein|organism=Clytia hemisphaerica|type=polypeptide|length=466bp
MKEDTRQRTKSGAKPDVRLALIGAPKVGKSAISVRFLTRRFIHEYQRSVE
HTYRRNLEFGNEVIEYVLRDSSGTVENNNNLIHWASCVAVIYSISDKNSF
NVASALLEEINFIYNSKNYKQNGPKSIGLIGNKKDLNHLREVSLREAKEL
ANKHGANFWEVSASDDFHSTHAPLNSMVVEAYLNNLTLKTVKGGLVSPGS
HVKGLDENIRNELISNQSIESDEGGLQPSTPFKIPMNPFDFSSEKRKSFK
DRKKLDLKLNQLKSESLKKISMGRTSLDNDNFDSNNNTNSNSPDTMSLST
DNDEPIRTSSWSKKDKKRKEKSKESKELKELKEMKLTEMNGVGHEEIEQK
KSNLQRCHSLTDLKSLEKEHHCEGVDSENKEDIEPHDVEDDKLTDLISPS
SKITSSFSRLSSYSAGSGVPIKSPRPRKERRKTTGLTMTPEHIETDLASP
RSPEPPREQSRFKRAE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042885XLOC_042885Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00068771TCONS_00068771Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR020849Small_GTPase_Ras
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007165 signal transduction
cellular_component GO:0016020 membrane
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 314..334
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 17..38
score: 34.03
coord: 40..56
score: 17.26
coord: 123..136
score: 42.62
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 17..185
e-value: 1.5E-6
score: -27.8
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 14..177
e-value: 8.2E-11
score: 36.8
NoneNo IPR availableGENE3D3.40.50.300coord: 12..185
e-value: 1.6E-20
score: 72.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 216..252
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 367..466
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 270..326
IPR001806Small GTPase superfamilyPFAMPF00071Rascoord: 19..167
e-value: 7.8E-22
score: 77.5
IPR020849Small GTPase superfamily, Ras typePROSITEPS51421RAScoord: 6..272
score: 11.617
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 15..168

Blast
[Close]
BLAST of TCONS_00068771-protein vs. Swiss-Prot (Human)
Match: RERG (Ras-related and estrogen-regulated growth inhibitor OS=Homo sapiens GN=RERG PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.113e-23
Identity = 55/153 (35.95%), Postives = 86/153 (56.21%), Query Frame = 0 
Query:   15 PDVRLALIGAPKVGKSAISVRFLTRRFIHEYQRSVEHTYRRNLEFGNEVIEYVLRDSSG---TVENNNNLIHWASCVAVIYSISDKNSFNVASALLEEINFIYNSKNYKQNGPKSIGLIGNKKDLNHLREVSLREAKELANKHGANFWEVSAS 164
             +V+LA+ G   VGKSA+ VRFLT+RFI EY  ++E TYR      +EV+   + D++G   T++   ++  W     ++Y I+D+ SF     L   ++ I   KN       ++ L+GNK DL+H R+VS  E ++LA +    F+E SA 
Sbjct:    5 AEVKLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQATIDDEVVSMEILDTAGQEDTIQREGHM-RWGEGFVLVYDITDRGSFEEVLPLKNILDEIKKPKNV------TLILVGNKADLDHSRQVSTEEGEKLATELACAFYECSAC 150
The following BLAST results are available for this feature:
BLAST of TCONS_00068771-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RERG1.113e-2335.95Ras-related and estrogen-regulated growth inhibito... [more]
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