TCONS_00068622-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00068622-protein
Unique Name	TCONS_00068622-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	651

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00068622-protein ID=TCONS_00068622-protein|Name=TCONS_00068622-protein|organism=Clytia hemisphaerica|type=polypeptide|length=651bp
MLLWKSIFLLCFIHLCFNGLTIASTDSEGEEKAEDLSENDSTVILIVILL
LIVTVLTIWLFKVKRFRFFHETGLCLIYGMIAGAILKYTGGTNQKPSLHT
NISIPTLAKSIIVSVDSDPYNYSYLLNGKTYTVKSKGGELEEKAVFDPEV
FFYALLPPIIFFAGYDMKKRFFFRNLGAILTFAFIGTTISCVVFGAMIWI
YFKMVHSSTDAFNFADSLLFGSLISATDPVTVLAIFHDLNVEVDLYAIVF
GESVMNDAVAIVLYKTIQSNYSSAFTAASFFTAVGNFIWIFGGSFLLGSA
MGLGTALLTKLTHISQFPRLETALFVLMSYSTFLIAESAKLTGIVTVLFC
GISQAHYTYNNLSKQSQVATKEIFGVLNFLAENFIFSYMGMTVFTFSQHN
WDPGFIAWCFLAIAVSRFLNIYPLSFLMNLKRSKKIPLNFQHMLFFAGLR
GAVAFALAIRNTESGQRKLMLTSVLVIAIVTVIFNGGLTTQALLKLGIRV
NVDQDEDIETEQHEDGAGQIHEDISYERSWLVRKWHNFDVKYMKPMFTSK
AGPVRGDVPRCCVPLASCLSPEERGERYERRSSMRRAEDEHGSIGSVGSI
DDDMLDIAVSHDVMTKPPSRELSREEQQPTRRQPEGPSDVNPDGMPLNII
S

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_042804	XLOC_042804	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00068622	TCONS_00068622	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004709	NaH_exchanger
IPR002090	Na/H_exchanger_6
IPR006153	Cation/H_exchanger

Vocabulary: **Biological Process**
Term	Definition
GO:0006885	regulation of pH
GO:0006814	sodium ion transport
GO:0055085	transmembrane transport
GO:0006812	cation transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0015385	sodium:proton antiporter activity
GO:0015299	solute:proton antiporter activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006812	cation transport
biological_process	GO:0006885	regulation of pH
biological_process	GO:0006814	sodium ion transport
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0015385	sodium:proton antiporter activity
molecular_function	GO:0015299	solute:proton antiporter activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004709	Na+/H+ exchanger	PRINTS	PR01084	NAHEXCHNGR	coord: 179..187 score: 67.95 coord: 221..231 score: 74.18 coord: 164..178 score: 52.4 coord: 150..161 score: 69.36
IPR004709	Na+/H+ exchanger	TIGRFAM	TIGR00840	TIGR00840	coord: 141..549 e-value: 4.2E-100 score: 333.6
IPR002090	Na+/H+ exchanger, isoform 6 (NHE6)	PRINTS	PR01088	NAHEXCHNGR6	coord: 521..539 score: 42.11 coord: 59..77 score: 68.42 coord: 545..573 score: 34.48 coord: 34..58 score: 52.0
IPR006153	Cation/H+ exchanger	PFAM	PF00999	Na_H_Exchanger	coord: 48..493 e-value: 1.7E-69 score: 234.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 573..651

Blast

[Close]

BLAST of TCONS_00068622-protein vs. Swiss-Prot (Human)
Match: SL9A9 (Sodium/hydrogen exchanger 9 OS=Homo sapiens GN=SLC9A9 PE=1 SV=1)

HSP 1 Score: 530.406 bits (1365), Expect = 0.000e+0
Identity = 299/630 (47.46%), Postives = 407/630 (64.60%), Query Frame = 0

Query:   31 EKAEDLSENDSTVILIVI-LLLIVTVLTIWLFKVKRFRFFHETGLCLIYGMIAGAILKY-TGGTN-QKPSLHTNISIPTLAKSIIVSVDSDPYNYSYLLNGKTYTVKS-KGGELEEKAVFDPEVFFYALLPPIIFFAGYDMKKRFFFRNLGAILTFAFIGTTISCVVFGAMIWIYFK-MVHS---STDAFNFADSLLFGSLISATDPVTVLAIFHDLNVEVDLYAIVFGESVMNDAVAIVLYKTIQSNYS-----SAFTAASFFTAVGNFIWIFGGSFLLGSAMGLGTALLTKLTHISQFPRLETALFVLMSYSTFLIAESAKLTGIVTVLFCGISQAHYTYNNLSKQSQVATKEIFGVLNFLAENFIFSYMGMTVFTFSQHNWDPGFIAWCFLAIAVSRFLNIYPLSFLMNLKRSKKIPLNFQHMLFFAGLRGAVAFALAIRNTESGQRKLMLTSVLVIAIVTVIFNGGLTTQALLKLGIRVNVDQDEDIE---TEQHEDGAGQIHEDISYERSWLVRKWHNFDVKYMKPMFTSKAGPVRGDVPRCCVPLASCL-SPEERGERYERRSSMRRAEDEHGSIGSVGSIDDDMLDIAVSHDVMT--KPPSRELSREEQQPTRRQPEGPSDVN 641
            EK E   ++   V L+V   LLI+T+LTIWLFK  RFRF HETG  ++YG+I G IL+Y T  T+ +  +++  + +     +++V++    Y Y Y      + +   +G  + EK  FDPE+FF  LLPPIIF AGY +KKR FF+NLG+ILT+AF+GT ISC+V G +++ + K M+H+       F+F D L FGSL+SATDPVTVLAIFH+L+V+ DLY ++FGESV+NDAVAIVL  +I S YS     +AF AA+FF +VGNF+ IF GSF +GSA  + TALLTK T + +FP LET LF L+S+S FL AE+A LTGIV VLFCG++QAHYTYNNLS  S++ TK++F  +NFLAEN IF YMG+ +FTF  H ++  FI   FLAI V+R  NIYPLSFL+NL R +KIP NFQHM+ F+GLRGA+AFALAIRNTES  +++M T+ L++   TV   GG TT  L  L IRV VD DE+++   + QH++           E + L R W++FD KY+KP+ T    P+   +P  C P++  L SP+  GE+ +        ED+   I     ++ D L I       +   PP+R L  ++    +  P+ P   N
Sbjct:   10 EKDEYQFQHQGAVELLVFNFLLILTILTIWLFKNHRFRFLHETGGAMVYGLIMGLILRYATAPTDIESGTVYDCVKLTFSPSTLLVNITDQVYEYKYKREISQHNINPHQGNAILEKMTFDPEIFFNVLLPPIIFHAGYSLKKRHFFQNLGSILTYAFLGTAISCIVIGLIMYGFVKAMIHAGQLKNGDFHFTDCLFFGSLMSATDPVTVLAIFHELHVDPDLYTLLFGESVLNDAVAIVLTYSI-SIYSPKENPNAFDAAAFFQSVGNFLGIFAGSFAMGSAYAIITALLTKFTKLCEFPMLETGLFFLLSWSAFLSAEAAGLTGIVAVLFCGVTQAHYTYNNLSSDSKIRTKQLFEFMNFLAENVIFCYMGLALFTFQNHIFNALFILGAFLAIFVARACNIYPLSFLLNLGRKQKIPWNFQHMMMFSGLRGAIAFALAIRNTESQPKQMMFTTTLLLVFFTVWVFGGGTTPMLTWLQIRVGVDLDENLKEDPSSQHQEANNLDKNMTKAESARLFRMWYSFDHKYLKPILTHSGPPLTTTLPEWCGPISRLLTSPQAYGEQLK--------EDDVECI-----VNQDELAINYQEQASSPCSPPAR-LGLDQ----KASPQTPGKEN 620

The following BLAST results are available for this feature:

BLAST of TCONS_00068622-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00068622-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
SL9A9	0.000e+0	47.46	Sodium/hydrogen exchanger 9 OS=Homo sapiens GN=SLC...	[more]

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TCONS_00068622-protein (polypeptide) - C. hemisphaerica