TCONS_00068500-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00068500-protein
Unique NameTCONS_00068500-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length235

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00068500-protein ID=TCONS_00068500-protein|Name=TCONS_00068500-protein|organism=Clytia hemisphaerica|type=polypeptide|length=235bp
MALATTLEDFLFSKSPPPDTQTLEQHQADEQIDVNILKLIRQEILPNSTS
LPQEFVDTLMKLLNRGSSHTTSTTMFDNVWEILRQKKFAKFEEIVHQKPN
IVNSLRDGDGWTLLVWAVLNDRFDVFVHLMEYPQDFSLVSNVDGWNILHY
VGRHGTVRYLEKFGQQTIEILINGRNKQNNTPLHFAARRNNHDVIRWLLA
KGADHEEKNEDGRRPDERCDGCDGVTKEIIQSFLD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042726XLOC_042726Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00068500TCONS_00068500Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR032817Mon2_C
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 109..138
e-value: 7.4
score: 15.5
coord: 143..172
e-value: 3300.0
score: 1.1
coord: 178..207
e-value: 5.6E-5
score: 32.6
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 178..210
score: 13.304
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 75..216
e-value: 3.9E-25
score: 87.9
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 114..208
e-value: 1.7E-11
score: 44.5
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 109..215
score: 19.439
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 101..215
IPR032817Mon2, C-terminalPFAMPF16206Mon2_Ccoord: 3..90
e-value: 5.8E-19
score: 67.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availableCDDcd00204ANKcoord: 106..215
e-value: 6.73952E-20
score: 81.2758

Blast
[Close]
BLAST of TCONS_00068500-protein vs. Swiss-Prot (Human)
Match: MON2 (Protein MON2 homolog OS=Homo sapiens GN=MON2 PE=1 SV=3)

HSP 1 Score: 80.8777 bits (198), Expect = 1.785e-17
Identity = 40/96 (41.67%), Postives = 66/96 (68.75%), Query Frame = 0 
Query:    3 LATTLEDFLFSKSPPPDTQTLEQHQADEQIDVNILKLIRQEILPNSTSLPQEFVDTLMKLLNRGSSHTTSTTMFDNVWEILRQKKFAK--FEEIVH 96
            LA T EDFLF+KS PPD  ++++ Q +E IDV +++LI  EILP +  +P+EFV  +M +LN+GS H+ S++  +   +I  +++F+K  FE ++ 
Sbjct: 1493 LANTFEDFLFTKSIPPDNLSIQEFQRNENIDVEVVQLISNEILPYANFIPKEFVGQIMTMLNKGSIHSQSSSFTEAEIDIRLREEFSKMCFETLLQ 1588
The following BLAST results are available for this feature:
BLAST of TCONS_00068500-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MON21.785e-1741.67Protein MON2 homolog OS=Homo sapiens GN=MON2 PE=1 ... [more]
back to top