TCONS_00068486-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00068486-protein
Unique NameTCONS_00068486-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length408

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00068486-protein ID=TCONS_00068486-protein|Name=TCONS_00068486-protein|organism=Clytia hemisphaerica|type=polypeptide|length=408bp
MPSVDELAAQAAEQMRLYEDQKETSQRRQEAAKNLQNASLQDKLNARLKK
KEEKQKIEQEKSEKYQLQASAGPAKVNPPKGVITFGYFVVKNVAVFWENL
DEDNALKVLEEIHELITKELVPNNVYLAKEEIGKCLLAAEKPEQLINMAL
KIQENFNNHSWSSTLTSIPSCKKLVRPEDTNNADAKPLFNGPRIQMGIHS
GDAATIKDNNGNTTYSGINILKVESIGNFAQPGQILVSSMTWSKIDASKL
VEHHSTQPGVYKLDGFSGGCKVAELLPISLKDRSKFFGSVCANCNDVIKP
NEQFFKALNCIWHINHFRCFQCNTDLGGSYVDVDGSPFCKNCYLLKNAPK
CKGCSNPITGAYINAIGVYWHADCFSCRQCLRKPSPDVQMYEKDGLPYCG
ECYKQMMN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042717XLOC_042717Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00068486TCONS_00068486Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001781Znf_LIM
IPR001054A/G_cyclase
IPR029787Nucleotide_cyclase
Vocabulary: Biological Process
TermDefinition
GO:0009190cyclic nucleotide biosynthetic process
GO:0035556intracellular signal transduction
Vocabulary: Molecular Function
TermDefinition
GO:0016849phosphorus-oxygen lyase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009190 cyclic nucleotide biosynthetic process
biological_process GO:0035556 intracellular signal transduction
molecular_function GO:0016849 phosphorus-oxygen lyase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 4..70
NoneNo IPR availableGENE3D2.10.110.10coord: 285..347
e-value: 2.4E-13
score: 49.3
NoneNo IPR availableGENE3D2.10.110.10coord: 348..408
e-value: 2.0E-17
score: 62.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..73
NoneNo IPR availableCDDcd08368LIMcoord: 291..343
e-value: 1.87924E-12
score: 60.7943
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 279..317
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 318..380
IPR001781Zinc finger, LIM-typeSMARTSM00132lim_4coord: 350..402
e-value: 7.0E-12
score: 55.5
coord: 290..342
e-value: 3.0E-14
score: 63.3
IPR001781Zinc finger, LIM-typePFAMPF00412LIMcoord: 291..344
e-value: 2.5E-12
score: 46.7
coord: 351..406
e-value: 1.9E-11
score: 43.9
IPR001781Zinc finger, LIM-typePROSITEPS50023LIM_DOMAIN_2coord: 289..347
score: 10.276
IPR001781Zinc finger, LIM-typePROSITEPS50023LIM_DOMAIN_2coord: 349..408
score: 12.929
IPR001054Adenylyl cyclase class-3/4/guanylyl cyclaseGENE3D3.30.70.1230coord: 81..284
e-value: 7.3E-17
score: 60.9
IPR029787Nucleotide cyclaseSUPERFAMILY55073Nucleotide cyclasecoord: 74..281

Blast
[Close]
BLAST of TCONS_00068486-protein vs. Swiss-Prot (Human)
Match: TGFI1 (Transforming growth factor beta-1-induced transcript 1 protein OS=Homo sapiens GN=TGFB1I1 PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.247e-20
Identity = 45/119 (37.82%), Postives = 65/119 (54.62%), Query Frame = 0 
Query:  290 VCANCNDVIKPNEQFFKALNCIWHINHFRCFQCNTDLGGS-YVDVDGSPFCKNCYLLKNAPKCKGCSNPITGAYINAIGVYWHADCFSCRQCLRKPSPDVQMYEKDGLPYCGECYKQMM 407
            +C +CN  I    Q   AL   WH  HF C  C+T LGGS + + DG+PFC  CY  + +P+C  C+ PI    + A+G +WH + F C  C  +P  D   +E++G PYC   + Q+ 
Sbjct:  227 LCGSCNKPIA--GQVVTALGRAWHPEHFVCGGCSTALGGSSFFEKDGAPFCPECYFERFSPRCGFCNQPIRHKMVTALGTHWHPEHFCCVSC-GEPFGDEGFHEREGRPYCRRDFLQLF 342

HSP 2 Score: 86.2705 bits (212), Expect = 2.553e-18
Identity = 41/114 (35.96%), Postives = 56/114 (49.12%), Query Frame = 0 
Query:  287 FGSVCANCNDVIKPNEQFFKALNCIWHINHFRCFQCNTDLGG-SYVDVDGSPFCKNCYLLKNAPKCKGCSNPITGAYINAIGVYWHADCFSCRQCLRKPSPDVQMYEKDGLPYC 399
            F   C  CN  I+   +   AL   WH  HF C  C    G   + + +G P+C+  +L   AP+C+GC  PI   YI+A+   WH DCF CR+C   P      +E +G P C
Sbjct:  283 FSPRCGFCNQPIR--HKMVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGRPYCRRDFLQLFAPRCQGCQGPILDNYISALSALWHPDCFVCRECF-APFSGGSFFEHEGRPLC 393

HSP 3 Score: 80.4925 bits (197), Expect = 2.161e-16
Identity = 43/136 (31.62%), Postives = 66/136 (48.53%), Query Frame = 0 
Query:  274 ELLPISLKDRSKFFGSVCANCNDVIKPNEQFFKALNCIWHINHFRCFQCNTDL-GGSYVDVDGSPFCKNCYLLKNAPKCKGCSNPITGAYINAIGVYWHADCFSCRQCLRKPSPDVQMYEKDGLPYCGECYKQMMN 408
            E  P   +D  + F   C  C   I  N  +  AL+ +WH + F C +C     GGS+ + +G P C+N +  +    C  C  P+TG  ++A+G  +H D F+C  CLR P       E+ G PYC  C+ ++  
Sbjct:  329 EGRPYCRRDFLQLFAPRCQGCQGPILDN--YISALSALWHPDCFVCRECFAPFSGGSFFEHEGRPLCENHFHARRGSLCATCGLPVTGRCVSALGRRFHPDHFTCTFCLR-PLTKGSFQERAGKPYCQPCFLKLFG 461
The following BLAST results are available for this feature:
BLAST of TCONS_00068486-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TGFI11.247e-2037.82Transforming growth factor beta-1-induced transcri... [more]
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