TCONS_00068399-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00068399-protein
Unique NameTCONS_00068399-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1281

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00068399-protein ID=TCONS_00068399-protein|Name=TCONS_00068399-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1281bp
MIYKMLILKLLLIVSCWIDHAALLGIPKITEMSIVKPPAIVGNSVLTLLC
KATGEGPIKVRWMFKGKTATENNFFESAKDAEGTSTLRVFDVSLEHSGIY
TCTAENRFGKVFNEKEVVVYKKGKFSPPHSREDPVKTIQATVGVPLTIEC
PPHEEGIGYKIVWGSLPLGGNPLLWLTGVTPLKNAYFGNHGEFHVQALTA
DLIKLIQDLGGVSCILYLDNAVVSNQINIDIGSQDINKAPVDNPPKMGRK
LPANTNATVGKDRQVDLTCGADGYPYPKITWYKDGVSIEVLNEKKDSNFT
VTGNGMILRINPVTSRAAGKYKCVAENFLGKEENEGTLTVNSVPKFVKGQ
ELQIRYDVIHDQKLVLSCRGEGTPSVSYQWYHNGSIVTNNERYKLDGGDL
IIKSAGFDHIGLYMCLIRNFVGLDVQPTYVIVEATPPTLIKGMDDPKYIF
KGEDQELKCSFRSAPAPSVTWQKDGRDISSANTGSLILKSVSDESSGRYN
CTATNVEGSAASIAQVIAVVKTKITNAPATLKTKVGTKMLELYCNAVYET
QLLDVKFQWLRKGKPFESNDRVYLERRLEGPKRVLFLTDIEMSDAGEYKC
RVFTHVKGDEGNIISEDVKTGSVAVIGKPPSPSNLAFSGNCSDTDSDIEI
TWEQRNNFGQSISTYIIEYGDRNADEDEWFKYKGNMVISEDKLSIPVKNL
PGSTDLKFRLTAVTYYESETFKSDSVVIVPDSCSTPAGAPAAWVATGLRT
NNKKAGQLVVEWDEPADIYKKGPNFCVEVTYQKLPDGEIKTVCIKDGNNF
VLEDAGEGEKYSISVRGKNDEGSGPETKKVLTSGAPAITGKPENLQVKYD
ANITFNWDKVQHATKYNFYYQEDASSRRRRRRRDTSSETKVTVTNNQTVL
IPKDLASQTSYSFYVKAANDWMEGDASETQTFQTKPSAPNTPSNADIDII
GHAVQVKWDPPKRSKPEVTGYVIRYKKKGSGTYFVKECDADCRDMFLTDL
EPFAYYTVELQAKSSAGLGDPIIFDGLVVSSPDKPGKPAPPPYVNENATI
INVNFMLPEEGYVGGLPDNFTIFYYPKDDQSDVKSISADFPNKENLTIEG
ITSGVYILYAVGENALGRSAPSGKTERTYVAPTMVPVPAHTDEDKAFYEE
LWFLILIIIILLILLIAIIICCCLNRRGGKYPVDAKEKERGGWDDNVPLK
DYASEPPSDNGPVSNGKPPVRSASQNSLKKPLTDDMDDDDDKDSLDDYGE
DSKFNEDGSFIGQYGDEEKIKSKDKNGTTKV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042679XLOC_042679Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00068399TCONS_00068399Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003598Ig_sub2
IPR003599Ig_sub
IPR003961FN3_dom
IPR013098Ig_I-set
IPR013783Ig-like_fold
IPR026966Neurofascin/L1/NrCAM_C
IPR007110Ig-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003598Immunoglobulin subtype 2SMARTSM00408igc2_5coord: 40..109
e-value: 5.8E-9
score: 45.8
coord: 359..422
e-value: 3.5E-6
score: 36.5
coord: 260..330
e-value: 2.6E-10
score: 50.3
coord: 450..508
e-value: 6.8E-9
score: 45.5
coord: 535..607
e-value: 0.17
score: 14.4
IPR003599Immunoglobulin subtypeSMARTSM00409IG_3ccoord: 444..519
e-value: 1.0E-4
score: 31.7
coord: 529..619
e-value: 2.1
score: 17.4
coord: 37..120
e-value: 6.8E-7
score: 38.9
coord: 254..341
e-value: 6.1E-8
score: 42.4
coord: 353..433
e-value: 0.0022
score: 27.2
IPR003961Fibronectin type IIISMARTSM00060FN3_2coord: 742..824
e-value: 0.14
score: 21.3
coord: 1035..1119
e-value: 19.0
score: 9.1
coord: 629..718
e-value: 0.33
score: 20.0
coord: 839..924
e-value: 0.083
score: 22.0
coord: 939..1019
e-value: 1.2E-5
score: 34.8
IPR003961Fibronectin type IIIPFAMPF00041fn3coord: 952..1020
e-value: 1.3E-7
score: 31.7
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 1037..1133
score: 10.288
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 744..837
score: 10.525
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 938..1033
score: 15.44
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 841..937
score: 12.048
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 631..738
score: 9.649
IPR003961Fibronectin type IIICDDcd00063FN3coord: 840..934
e-value: 1.10468E-6
score: 47.1059
IPR003961Fibronectin type IIICDDcd00063FN3coord: 939..1021
e-value: 5.62674E-10
score: 57.1211
IPR003961Fibronectin type IIICDDcd00063FN3coord: 746..830
e-value: 9.18384E-5
score: 41.3279
IPR003961Fibronectin type IIICDDcd00063FN3coord: 629..714
e-value: 1.02053E-5
score: 44.0243
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 1032..1126
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 628..829
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 852..1021
IPR013098Immunoglobulin I-setPFAMPF07679I-setcoord: 255..340
e-value: 1.2E-14
score: 54.1
coord: 43..118
e-value: 9.0E-12
score: 44.8
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 353..437
e-value: 1.1E-13
score: 50.5
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 31..163
e-value: 1.5E-14
score: 53.6
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 492..523
e-value: 0.0012
score: 18.3
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 638..725
e-value: 7.0E-9
score: 35.5
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 249..352
e-value: 1.9E-18
score: 65.8
coord: 524..637
e-value: 3.9E-9
score: 35.8
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 438..491
e-value: 1.5E-12
score: 47.0
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 726..824
e-value: 2.3E-8
score: 33.5
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 878..933
e-value: 1.0E-8
score: 34.9
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 934..1024
e-value: 1.2E-15
score: 57.1
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 1029..1134
e-value: 0.001
score: 18.6
IPR026966Neurofascin/L1/NrCAM, C-terminal domainPFAMPF13882Bravo_FIGEYcoord: 1176..1267
e-value: 5.5E-15
score: 56.4
NoneNo IPR availableGENE3D2.60.40.1410coord: 825..877
e-value: 0.014
score: 14.4
NoneNo IPR availablePFAMPF13927Ig_3coord: 449..505
e-value: 1.8E-11
score: 44.4
coord: 358..419
e-value: 1.6E-7
score: 31.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 926..945
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1184..1281
NoneNo IPR availableCDDcd00096Igcoord: 540..602
e-value: 1.69996E-4
score: 40.1651
NoneNo IPR availableCDDcd00096Igcoord: 456..515
e-value: 9.86664E-9
score: 52.8767
NoneNo IPR availableCDDcd00096Igcoord: 46..111
e-value: 7.88452E-11
score: 59.0399
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 344..433
score: 9.99
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 437..518
score: 12.822
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 522..619
score: 10.172
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 27..118
score: 13.747
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 245..339
score: 12.931
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 436..510
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 524..607
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 256..347
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 357..437
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 37..122

Blast
BLAST of TCONS_00068399-protein vs. Swiss-Prot (Human)
Match: L1CAM (Neural cell adhesion molecule L1 OS=Homo sapiens GN=L1CAM PE=1 SV=2)

HSP 1 Score: 229.565 bits (584), Expect = 4.398e-61
Identity = 314/1322 (23.75%), Postives = 522/1322 (39.49%), Query Frame = 0
Query:   34 IVKPPAIVGNSV----------LTLLCKATGEGPIKVRWM-----FKGKTATENNFFESAKDAEGTSTLRVFDVSLEHSGIYTCTAENRFGKVFNEKEVVVYKKGKFSPPHSREDPVKTIQATVGVPLTIECPPHEEGIGYKIVWGS-----------LPLGGNPLLWLTGVTPLKNAYFGNHGEFHVQALTADLIKLIQDLGGVSCILYLDNAVVSNQINIDIGSQDINKAPVDNPPKMGRKLPANTNATVGKDRQVDLTCGADGYPYPKITWYKDGVSIEVLNEKKDSNFTVTGNGMILRINPVTSRAAGKYKCVAENFLGKEENEGTLTVNSVPKFVKGQELQIRYDVIHDQKLVLSCRGEGTPSVSYQWYHNGSIV---TNNERYKLDGGDLIIKSAGFDHIGLYMCLIRNFVGLDVQPTYVIVEATPPTLIKGMDDPKYIFKGEDQELKCSFRSAPAPSVTW--------QKDGRDISSANTGSLILKSVSDESSGRYNCTATNVEGSAASIAQVIAVVKTKITNAPATLKTKVGTKMLELYCNAVYETQLLDVKFQWLRKGKPFES---NDRVYLERRLEGPKRVLFLTDIEMSDAGEYKCRVFTHVKGDEGNIISEDVKTGSVAVIGKPPSPSNLAFSGNCSDTDSDIEITWEQRNNFGQSISTYIIEYGDRNADEDEWF---KYKGNMVISEDKLSIPVKNLPGSTDLKFRLTAVTYY-ESETFKSDSVVIVPDSCSTPAGAPAAWVATGLRTNNKKAGQLVVEWDEPADIYKKGPNFCVEVTYQ-KLPDGEIKTVCIKDGNNFVLEDAGEGEKYSISVRGKNDEGSGPETKKVLTSGA---PAITGKPENLQVKYDANITFNWDKVQ------HATKYNFYYQEDASSRRRRRRRDTSSETKVTVTNNQTVLIPKDLASQTSYSFYVKAANDWMEGDASETQTFQTKPSAPNTPSNADIDIIGH-AVQVKWDPPKRSKPEVTGYVIRYK---KKGSGTYFVKECDADCRDMFLTDLEPFAYYTVELQAKSSAGLGDPIIFDG--LVVSSPDKPGKPAPPPYVNENATIINVNFMLPEEGYVGGLPDNFTIFYYPKDDQSDVKSISADFP--NKENLTIEGITSGVYILYAVGENALGRSAPSGKTERTYVAPTMVPVPAHTDEDKAFYEELWFLILIIIILLILLIAIIICCCLNRRGGKYPVDAKEKERGGWDDNV-PLKD-----YASEPPSDNGPVSNGKPPVRSASQNSLK---KPLTDDMDDDDDKDSLDDYGE--DSKFNEDGSFIGQYG---DEEKIKSKDKNGTT 1279
            +++PP I   S           ++L C+A+G+  ++ RW      FK K       ++S      T T    + +    GIY C A N+ G   +  E+ +  +G    P   ++ VK ++   G  + + C P       +I W +           + +G N  L+   V    N     H ++   A       +IQ                  +  ID+  +  N   +D  P++     ++++    + + + L C A+G+P P I W +    +           T   +   L++  V     G+Y+C+AEN LG   +   +TV + P ++   +  +       +   L C+ +G P     W  NG  V     +++Y++  G LI+ +       +  C  RN  GL +   Y+ V   P  ++   +      +G    L C    AP PSV W         +D R    AN G+L ++ +    +GRY C A N + +   +A +     T+IT  P +   K G+++    C A ++   L     W   G+  +    +D+ ++E         L +  ++ SD G Y C     V   E +++    +   + V+G P     L  S     T S + ++W    +    I  Y IE+ D+    ++W+   K  GN   +  KLS  V          FR+TA+  Y   E       V+ P++   P   P      G  T N     +V+ W     +    P     V ++ +   G  +   + D    V+ +      Y I V+  N +G GPE +  +       P    + E +++   + +   W  V       H   YN  Y  + S R+  +R     +  V V  N T +I   L   +SY   V+A N    G ASE  TF T    P  P    ++   + ++ ++W PP      +TGYV+ Y    + G G       D + R   LTDL P   Y  +LQA +  G G+ I+ +G  + +S     G  +      EN ++++    +P+EG        F I +    ++    S+S  +   N+ + T   +         + +  + R   + KT  T      V +P        F  E WF+  +  I+L+LL+ +I+C     +GGKY V  K+KE    D    P+KD     Y S   SDN   + G      +SQ SL    KPL  D       DSL DYG   D +FNEDGSFIGQY    ++E     D +G T
Sbjct:   31 VMEPPVITEQSPRRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSPHSGSFTITGNNSNFAQRFQGIYRCFASNKLGTAMSH-EIRLMAEGA---PKWPKETVKPVEVEEGESVVLPCNPPPSAEPLRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDN-----HSDYICHAHFPGTRTIIQ------------------KEPIDLRVKATNSM-IDRKPRLLFPTNSSSHLVALQGQPLVLECIAEGFPTPTIKWLRPSGPMPA------DRVTYQNHNKTLQLLKVGEEDDGEYRCLAENSLGSARHAYYVTVEAAPYWLHKPQSHLYGP---GETARLDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEARNRHGLLLANAYIYVVQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYAN-GTLGIRDLQANDTGRYFCLAANDQNNVTIMANLKVKDATQITQGPRSTIEKKGSRVT-FTCQASFDPS-LQPSITWRGDGRDLQELGDSDKYFIE------DGRLVIHSLDYSDQGNYSC-----VASTELDVVESRAQ---LLVVGSPGPVPRLVLSDLHLLTQSQVRVSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLKLSPYVH-------YTFRVTAINKYGPGEPSPVSETVVTPEAA--PEKNPVDVKGEGNETTN-----MVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQIVSD-PFLVVSNTSTFVPYEIKVQAVNSQGKGPEPQVTIGYSGEDYPQAIPELEGIEILNSSAVLVKWRPVDLAQVKGHLRGYNVTYWREGSQRKHSKRH--IHKDHVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGSGPASEF-TFSTPEGVPGHPEALHLECQSNTSLLLRWQPPLSHNGVLTGYVLSYHPLDEGGKGQLSFNLRDPELRTHNLTDLSPHLRYRFQLQATTKEGPGEAIVREGGTMALSGISDFGNIS--ATAGENYSVVS---WVPKEGQCNF---RFHILFKALGEEKGGASLSPQYVSYNQSSYTQWDLQPDTDYEIHLFKERMFRHQMAVKTNGT----GRVRLPP-----AGFATEGWFIGFVSAIILLLLVLLILCFIKRSKGGKYSV--KDKEDTQVDSEARPMKDETFGEYRSL-ESDNEEKAFG------SSQPSLNGDIKPLGSD-------DSLADYGGSVDVQFNEDGSFIGQYSGKKEKEAAGGNDSSGAT 1247          
The following BLAST results are available for this feature:
BLAST of TCONS_00068399-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
L1CAM4.398e-6123.75Neural cell adhesion molecule L1 OS=Homo sapiens G... [more]
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