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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00068268-protein ID=TCONS_00068268-protein|Name=TCONS_00068268-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1255bp
MFSNLTWFVAVLICWSFVDWKVDAQLSPGKANVCAETIKQPYYVSVRKSR
TDYQNYRTCCRRVLRFCTSRCTRSRKITVYYTTAEVRYKQGYRYFCCSGW
ARQGDSCPTPICNPGCVNGHCSRPGVCTCKSGYNGNRCEKDINECSSKAL
NGCQHKCLNNMGSFTCACNKGYKLLPDGKSCQDINECSTLNGGCNQICTN
KPGSFQCSCRRGFRLSSDGKTCKDINECSEQKPCDNNNGICKNTFGSYQC
FCEVGFQLLSDKKTCRDINECSKKELNGCQHKCSNTVGSFFCSCNVGYRL
NADKKKCDDINECIEQTDKCGHNCHNTIGSYTCSCRPGYRLNGDKILCKA
LPCVTVSSLNHGNISCTGYVTDQSCSYECHSGFNLLGSDQRTCLPSSQWS
GNAPQCQRKDCPTIEAPEHGSIMIPCVAKYGFTCLKKCSKGFYLDGTTSA
KCVLEGNQTTWTAKDSICRASTPCEPNPCLNNGQCLETSIDTFVCDCSGT
LSKGKLCDIGIVDIPTLPQLVLNQWSTDIEIMARPTAFVNIVPKSRMELT
FDPPEIRIEVPESSAKFQILSSKTGVFEVEFVIQGRNDFEFETPKPKQVY
VFPKKTSLLVDMDISTVIDNAKLIQRNLTDTLVLKSMCSNGENVVGFTTI
QSKSVVLPVSMVGVEKVTLTALKERGILNPVDEIESFLKTKEISIFDYQC
VNATSELAQQVEYAIKYNFFQAAYLKKFTVSMPTWFELAKTFSEPEYNSA
NLASQLVTLEDIFSLKCYATGSQGKNRLSKGIHSLYQPYTPVLLKILDKK
FEMSKTNRICYFANLEENSFHINSDSPVNFISSPSPDHIFEKLQSSYMSV
SPTKEEFFVDFSMKMKSFDGRFKGKGFMTLEDSDKFFTRMFNSQNKISGN
IALDFDVNLKFLGKTLAVEGKSTQAEYNLTSSGKRDATLKLTTSVNQIKF
QSPNAAIRFSPRAKSKLSIEVPMLATGGQIRSISNENALKTYSRYLTRAE
RNSQGVGNLLATLDQKLADIWSSKTTEYFKHLGNFNTFVMMGLDSTNYYE
AINTLQPVKESYINFKSFANVLVENFKNENANQRLVLALRNVLRALSRTD
QLEILPQLEPIKFVDVNGLQMKYSGGLCIYQLCFPSMGSIEIDSPFNKNH
ITIKSNLTTFNASSRLHFTDKDSLQINIDKHIGTFTATLTGNLKVFDKVF
SIQFSFDQDKFAYSSTISVEGFPSTGFTVSKTKQISNVQWEDKLLKQNSY
KIELQ Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005509 | calcium ion binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005509 |
calcium ion binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR000436 | Sushi/SCR/CCP domain | SMART | SM00032 | CCP_2 | coord: 353..406
e-value: 1.7E-10
score: 50.9
coord: 411..468
e-value: 0.0011
score: 28.3 |
| IPR000436 | Sushi/SCR/CCP domain | PFAM | PF00084 | Sushi | coord: 353..406
e-value: 1.7E-7
score: 31.6 |
| IPR000436 | Sushi/SCR/CCP domain | PROSITE | PS50923 | SUSHI | coord: 346..408
score: 10.074 |
| IPR000436 | Sushi/SCR/CCP domain | PROSITE | PS50923 | SUSHI | coord: 409..470
score: 7.826 |
| IPR000436 | Sushi/SCR/CCP domain | CDD | cd00033 | CCP | coord: 353..407
e-value: 5.03122E-10
score: 56.3172 |
| IPR000436 | Sushi/SCR/CCP domain | CDD | cd00033 | CCP | coord: 411..469
e-value: 0.00286658
score: 36.2868 |
| IPR000436 | Sushi/SCR/CCP domain | SUPERFAMILY | 57535 | Complement control module/SCR domain | coord: 406..469 |
| IPR000436 | Sushi/SCR/CCP domain | SUPERFAMILY | 57535 | Complement control module/SCR domain | coord: 353..420 |
| IPR000742 | EGF-like domain | SMART | SM00181 | egf_5 | coord: 144..182
e-value: 1.6E-5
score: 34.3
coord: 111..139
e-value: 2.6
score: 17.0
coord: 186..223
e-value: 3.0E-4
score: 30.1
coord: 312..349
e-value: 7.1E-4
score: 28.9
coord: 473..508
e-value: 1.5
score: 17.9
coord: 227..266
e-value: 6.3E-7
score: 39.0
coord: 392..453
e-value: 200.0
score: 1.2
coord: 270..308
e-value: 5.1E-4
score: 29.3 |
| IPR000742 | EGF-like domain | PROSITE | PS50026 | EGF_3 | coord: 224..266
score: 13.417 |
| IPR000742 | EGF-like domain | PROSITE | PS50026 | EGF_3 | coord: 103..139
score: 7.733 |
| IPR000742 | EGF-like domain | PROSITE | PS50026 | EGF_3 | coord: 267..308
score: 9.511 |
| IPR000742 | EGF-like domain | PROSITE | PS50026 | EGF_3 | coord: 141..182
score: 9.291 |
| IPR000742 | EGF-like domain | PROSITE | PS50026 | EGF_3 | coord: 183..223
score: 7.436 |
| IPR000742 | EGF-like domain | PROSITE | PS50026 | EGF_3 | coord: 470..508
score: 13.821 |
| IPR000742 | EGF-like domain | PROSITE | PS50026 | EGF_3 | coord: 309..349
score: 9.241 |
| IPR001881 | EGF-like calcium-binding domain | SMART | SM00179 | egfca_6 | coord: 224..266
e-value: 3.2E-11
score: 53.3
coord: 474..508
e-value: 1.1
score: 1.5
coord: 183..223
e-value: 1.2E-10
score: 51.4
coord: 267..308
e-value: 8.0E-10
score: 48.6
coord: 141..182
e-value: 1.9E-11
score: 54.0
coord: 309..349
e-value: 5.7E-10
score: 49.1 |
| IPR001881 | EGF-like calcium-binding domain | PFAM | PF07645 | EGF_CA | coord: 224..265
e-value: 1.4E-7
score: 31.5
coord: 309..345
e-value: 3.0E-9
score: 36.8
coord: 267..307
e-value: 1.4E-7
score: 31.5 |
| None | No IPR available | PFAM | PF14670 | FXa_inhibition | coord: 187..222
e-value: 1.2E-10
score: 41.4 |
| None | No IPR available | GENE3D | 2.10.70.10 | | coord: 347..406
e-value: 4.1E-14
score: 52.3 |
| None | No IPR available | GENE3D | 2.10.25.10 | | coord: 225..248
e-value: 1.4E-10
score: 40.6
coord: 268..290
e-value: 9.9E-10
score: 37.9
coord: 183..205
e-value: 1.1E-9
score: 37.8 |
| None | No IPR available | GENE3D | 2.10.25.10 | | coord: 311..346
e-value: 3.4E-13
score: 49.0 |
| None | No IPR available | GENE3D | 2.10.25.10 | | coord: 206..224
e-value: 2.1E-14
score: 52.6
coord: 165..182
e-value: 5.0E-15
score: 54.6
coord: 249..267
e-value: 6.4E-12
score: 44.6
coord: 291..310
e-value: 9.1E-13
score: 47.3 |
| None | No IPR available | GENE3D | 2.10.70.10 | | coord: 407..466
e-value: 1.4E-7
score: 31.5 |
| None | No IPR available | GENE3D | 2.10.25.10 | | coord: 143..164
e-value: 4.9E-6
score: 25.8 |
| None | No IPR available | GENE3D | 2.10.25.10 | | coord: 100..142
e-value: 0.031
score: 14.0 |
| None | No IPR available | GENE3D | 2.10.25.10 | | coord: 467..511
e-value: 7.1E-7
score: 28.6 |
| None | No IPR available | CDD | cd00054 | EGF_CA | coord: 267..300
e-value: 3.20265E-5
score: 41.8534 |
| None | No IPR available | CDD | cd00054 | EGF_CA | coord: 309..341
e-value: 9.38497E-7
score: 46.4758 |
| None | No IPR available | CDD | cd00054 | EGF_CA | coord: 224..258
e-value: 1.9263E-7
score: 48.4018 |
| None | No IPR available | SUPERFAMILY | 57196 | EGF/Laminin | coord: 472..509 |
| IPR026823 | Complement Clr-like EGF domain | PFAM | PF12662 | cEGF | coord: 163..186
e-value: 7.3E-11
score: 41.7 |
| IPR000152 | EGF-type aspartate/asparagine hydroxylation site | PROSITE | PS00010 | ASX_HYDROXYL | coord: 324..335 |
| IPR000152 | EGF-type aspartate/asparagine hydroxylation site | PROSITE | PS00010 | ASX_HYDROXYL | coord: 283..294 |
| IPR000152 | EGF-type aspartate/asparagine hydroxylation site | PROSITE | PS00010 | ASX_HYDROXYL | coord: 157..168 |
| IPR000152 | EGF-type aspartate/asparagine hydroxylation site | PROSITE | PS00010 | ASX_HYDROXYL | coord: 241..252 |
| IPR000152 | EGF-type aspartate/asparagine hydroxylation site | PROSITE | PS00010 | ASX_HYDROXYL | coord: 198..209 |
| IPR013032 | EGF-like, conserved site | PROSITE | PS01186 | EGF_2 | coord: 207..222 |
| IPR013032 | EGF-like, conserved site | PROSITE | PS01186 | EGF_2 | coord: 292..307 |
| IPR013032 | EGF-like, conserved site | PROSITE | PS01186 | EGF_2 | coord: 333..348 |
| IPR013032 | EGF-like, conserved site | PROSITE | PS01186 | EGF_2 | coord: 166..181 |
| IPR013032 | EGF-like, conserved site | PROSITE | PS00022 | EGF_1 | coord: 127..138 |
| IPR013032 | EGF-like, conserved site | PROSITE | PS01186 | EGF_2 | coord: 250..265 |
| IPR013032 | EGF-like, conserved site | PROSITE | PS01186 | EGF_2 | coord: 127..138 |
| IPR018097 | EGF-like calcium-binding, conserved site | PROSITE | PS01187 | EGF_CA | coord: 309..333 |
| IPR009030 | Growth factor receptor cysteine-rich domain | SUPERFAMILY | 57184 | Growth factor receptor domain | coord: 227..353 |
| IPR009030 | Growth factor receptor cysteine-rich domain | SUPERFAMILY | 57184 | Growth factor receptor domain | coord: 96..228 |
Blast
BLAST of TCONS_00068268-protein vs. Swiss-Prot (Human)
Match: MATN2 (Matrilin-2 OS=Homo sapiens GN=MATN2 PE=1 SV=4) HSP 1 Score: 170.629 bits (431), Expect = 4.988e-43 Identity = 147/498 (29.52%), Postives = 232/498 (46.59%), Query Frame = 0
Query: 87 RYKQGYRYFCCSGWARQGDSCPTPI--CNPGCVNGHCSRPG--VCTCKSGY----NGNRCEKDINECSSKALNGCQHKCLNNMGSFTCACNKGYKLLPDGKSCQDINECSTLNGGCNQICTNKPGSFQCSCRRGFRLSSDGKTCKDINECSEQKP-CDNNNGICKNTFGSYQCFCEVGFQLLSDKKTCRDINECSKKELNGCQHKCSNTVGSFFCSCNVGYRLNADKKKCDDINECIEQTDKCGHNCHNTIGSYTCSCRPGYRLNGDKILCKALPCVTVSSLNHG-NISCTGYVTDQSCSYECHSGFNLLGSDQRTCLPSSQWSGNAPQCQRKDCPTIEAPEHGSIMIPCVAKYGFTCLKKCSKGFYLDGTTSAKCVLEGNQTTWTAKDSICRASTPCEPNPCLNNGQCLETSIDTFVCDCSGTL------SKGKLCDIGIVDIPTLPQLVLNQWSTDIEIMARPTAFVNIVPKSRMELTFDPPEIRIEVPESSAKFQ 568
R KQGY R D C C CVN PG VC C SGY +G RC ++ C+S+ +GC+H+C+N GS+ C C++G+ L PD K+C I+ C++ N GC C N S+ C C +GF L+ D KTC+ IN C+ KP C++ C N SY C C G+ L + KTC ++ C++++ +GC+ C NT SF C C+ G+ +N D K C ++ C+ C ++C N S+ C C G+ L D C L + +HG SC ++ S +C G+ +L D +T C+RKD +A +HG I + +TC +C +GF L +C + +C+++ + C+NNG ++++C CS + K C G +D+ + + + E++ + FV + S LT P R+ + + S +
Sbjct: 263 RCKQGYILNSDQTTCRIQDLCAMEDHNCEQLCVN----VPGSFVCQCYSGYALAEDGKRCVA-VDYCASEN-HGCEHECVNADGSYLCQCHEGFALNPDKKTCTKIDYCASSNHGCQHECVNTDDSYSCHCLKGFTLNPDKKTCRRINYCALNKPGCEHE---CVNMEESYYCRCHRGYTLDPNGKTCSRVDHCAQQD-HGCEQLCLNTEDSFVCQCSEGFLINEDLKTCSRVDYCLLSDHGCEYSCVNMDRSFACQCPEGHVLRSDGKTCAKLDSCALG--DHGCEHSCVS--SEDSFVCQCFEGY-ILREDGKT-------------CRRKD--VCQAIDHGCEHICVNSDDSYTC--ECLEGFRL-AEDGKRC----------RRKDVCKSTHHGCEHICVNNG-------NSYICKCSEGFVLAEDGRRCKKCTEGPIDLVFVIDGSKSLGEENFEVVKQ---FVTGIIDS---LTISPKAARVGLLQYSTQVH 704 HSP 2 Score: 150.599 bits (379), Expect = 1.001e-36 Identity = 95/246 (38.62%), Postives = 126/246 (51.22%), Query Frame = 0
Query: 151 NGCQHKCLNNMGSFTCACNKGYKLLPDGKSCQDINECSTLNGGCNQICTNKPGSFQCSCRRGFRLSSDGKTCKDINEC-SEQKPCDNNNGICKNTFGSYQCFCEVGFQLLSDKKTCRDINECSKKELNGCQHKCSNTVGSFFCSCNVGYRLNADKKKCDDINECIEQTDKCGHNCHNTIGSYTCSCRPGYRLNGDKILCKALPCVTVSSLNHGNISCTGYV--TDQSCSYECHSGFNLLGSDQRTC 393
+ C H C+N GS+ C C +GY L D +C+ + C+ + C Q+C N PGSF C C G+ L+ DGK C ++ C SE C++ C N GSY C C GF L DKKTC I+ C+ +GCQH+C NT S+ C C G+ LN DKK C IN C C H C N SY C C GY L+ + C + + +HG C T+ S +C GF L+ D +TC
Sbjct: 247 HNCAHFCINIPGSYVCRCKQGYILNSDQTTCRIQDLCAMEDHNCEQLCVNVPGSFVCQCYSGYALAEDGKRCVAVDYCASENHGCEHE---CVNADGSYLCQCHEGFALNPDKKTCTKIDYCASSN-HGCQHECVNTDDSYSCHCLKGFTLNPDKKTCRRINYCALNKPGCEHECVNMEESYYCRCHRGYTLDPNGKTCSRVD--HCAQQDHG---CEQLCLNTEDSFVCQCSEGF-LINEDLKTC 482
The following BLAST results are available for this feature:
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