|
|
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00068263-protein ID=TCONS_00068263-protein|Name=TCONS_00068263-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1056bp
MLLTKYRACCGILWIETFTIFAGNKLFIQAAQSIDQCETEILVSVFGTFG
LCFMVFAIVLIACFMARKKQTRPLNQYATANQQGSHKMNDIEGRRNKVFE
DEKDDDEFPNGGRKRQDSGFIASSNESIVPLPEMYNLGPRRSPSMPNLRL
NSNNEQQTNSEGEVFAIEANSVQKNHPKCPKMVSIGLSTDDLDHNMNLKS
LMLPRLTETVVLQKKSSNCTGLDFGVGGVYIKDFDKRDIAFKKGELSIGD
EVLSINNHSLSGSTHMEAFSLLAKSGLEVKLEIIRGVFADKADNTSLYSA
DFQMFQSSSDDEELMETHNQKIFSSTSSTNIPKSFSGENLNRLPRVIADA
DNLSFDGNESIDLARIKRNTSDSYLLKTVSTVHSNNSSQSESGSPKRFIA
EQPSDASTRTDLHGNNGTTNTVEVHQELSKILLANPNLFMDFLASVQAKE
KPCPRLKRNSNDSCEHCHHSRNTSSERQRQHSRHSSNEQYIGHAHYGSDH
RHNRNCSCENPRFLPHNDETNDDSNFSKFHRTNSSDELGSNVNGHSKIYR
SQSVESTTNAPIFTIDSYSRHPEQNHVNRPVIDSLPQPPKQPSDVEQKQR
LYELLKQKASLEQLIHQHQQQNKSNELVNSSAHPENVVVQRGYNNDYIVP
INGSTYPNIAAGYSKQMHRSKDNSPVRRTSPVVFPTQNVPRFVATTSINS
TITTTGSEYRHSSSPHLGSPQNSISTTTPVSLQRKPPPDYASIKRNTSDL
SGDESTVVVPTTSPQRDPVNIDADFMRKMTQKYSEPRLRKNPPPYYNAVS
DGGNPEGVVLRKKTHNSSNRSRPHSYTETGGNVVYDPNIIFNDSMRGNLN
PQNTPNLPTEPNTEIDTEKRKHPKRTHSMPAVKQIDLRPQSAQSFLTNNT
SNDNLTQIPPQIAPQYQTVNTQQPPPAFTEQLPQYQPPQLSGAQAAPHYI
EPAVSAPYLTQATSEETLHTSTGEYQQAPKKLRTRQQRAQDSFNRRKSID
SGTLRKLAEEMYENPALGGEFPILSQLLGESQFTASERRSQALYRHKSTE
ALFTQF Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR001478 | PDZ |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 601..621 |
| None | No IPR available | GENE3D | 2.30.42.10 | | coord: 205..288
e-value: 4.5E-12
score: 45.3 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 968..998 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 849..878 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 454..487 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 704..771 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 381..418 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 569..597 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 135..158 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 519..544 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 100..122 |
| None | No IPR available | CDD | cd00992 | PDZ_signaling | coord: 209..284
e-value: 8.2788E-11
score: 58.7322 |
| IPR001478 | PDZ domain | SMART | SM00228 | pdz_new | coord: 220..287
e-value: 3.0E-9
score: 46.7 |
| IPR001478 | PDZ domain | PFAM | PF00595 | PDZ | coord: 225..283
e-value: 2.3E-7
score: 31.0 |
| IPR001478 | PDZ domain | PROSITE | PS50106 | PDZ | coord: 209..287
score: 15.601 |
| IPR001478 | PDZ domain | SUPERFAMILY | 50156 | PDZ domain-like | coord: 201..286 |
Blast
The following BLAST results are available for this feature:
|
