TCONS_00068158-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00068158-protein
Unique NameTCONS_00068158-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length264

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00068158-protein ID=TCONS_00068158-protein|Name=TCONS_00068158-protein|organism=Clytia hemisphaerica|type=polypeptide|length=264bp
IISLLMKILSAGYEMIFYHCRAMEVIRKKLGGLKSKLDEAERQANATEDE
LNSINEKADDTEEQVKLVQDKLSSIEEELDDTERRHETVSQKLVELEVRG
DEVQRQYGELTARSETDQIKIDALEEQLSEVKSKDEELSANYETISQELS
EIEATYDEEEERCQEADVRVKTLEEKFIQLGNNLRSMERYEMKSNERGTE
IQEKIEELEAKCAEAKEKAEQYEAKSKEMEDELESLEQQCHDEKERYFSC
KGDLERILEEVQGI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042542XLOC_042542Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00068158TCONS_00068158Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000533Tropomyosin
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 198..246
NoneNo IPR availableCOILSCoilCoilcoord: 23..99
NoneNo IPR availableCOILSCoilCoilcoord: 114..176
NoneNo IPR availableGENE3D1.20.5.340coord: 78..131
e-value: 5.6E-7
score: 29.1
NoneNo IPR availableGENE3D1.20.1270.70coord: 21..77
e-value: 0.0091
score: 15.7
NoneNo IPR availableGENE3D1.20.5.50coord: 182..263
e-value: 2.0E-4
score: 20.6
NoneNo IPR availableGENE3D1.20.5.1070coord: 132..181
e-value: 4.7E-4
score: 19.6
NoneNo IPR availableSUPERFAMILY57997Tropomyosincoord: 24..263
IPR000533TropomyosinPRINTSPR00194TROPOMYOSINcoord: 125..153
score: 35.75
coord: 64..81
score: 30.64
coord: 211..236
score: 28.83
coord: 100..120
score: 28.99
coord: 155..178
score: 26.42
IPR000533TropomyosinPFAMPF00261Tropomyosincoord: 28..262
e-value: 4.1E-28
score: 98.2

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00068158-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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