TCONS_00067889-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00067889-protein
Unique NameTCONS_00067889-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length405

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00067889-protein ID=TCONS_00067889-protein|Name=TCONS_00067889-protein|organism=Clytia hemisphaerica|type=polypeptide|length=405bp
MSVLDRVPQWAVKVVGTFILFLLSMIFGALPLKLQRDVNTRNKENGSMRK
LLISLSNCFAGGVFFSTVILDLFPDVREKMDEALDLVDIQTDFPLGDFII
GFGFIFMLILEQLVESCCSNSNFLNHGHSHGKVGSDMVFENDPDETHQLL
PDAPPDDTIMQSAGPINQNKKTVAIGPSTILSGNSISYTDSEEEFEQSGS
YNSFVSNNGTRHRVRKLHRTRTKSLASMQSVSTSNFRLYMMVFAISLHSL
FEGLSVGLLVKTQVLLQILVALLIHKSIISFSIGVQLVDADLPTSVVLIC
LAIFAAMAPLGVGLGMLLLKSLDKVIKTFISGILQGIATGTFLYVTFFEV
LPHELNIVDRKLLKIMFVMLGYFVITGVCYFENRFHKASGVQPAHNKTEV
FSVLG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042403XLOC_042403Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00067889TCONS_00067889Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003689ZIP
Vocabulary: Biological Process
TermDefinition
GO:0030001metal ion transport
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0046873metal ion transmembrane transporter activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030001 metal ion transport
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016020 membrane
molecular_function GO:0046873 metal ion transmembrane transporter activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003689Zinc/iron permeasePFAMPF02535Zipcoord: 12..376
e-value: 2.1E-55
score: 188.2

Blast
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BLAST of TCONS_00067889-protein vs. Swiss-Prot (Human)
Match: S39A1 (Zinc transporter ZIP1 OS=Homo sapiens GN=SLC39A1 PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.909e-30
Identity = 62/176 (35.23%), Postives = 107/176 (60.80%), Query Frame = 0 
Query:  207 NNGTRHRVRKLHRTRTKSLASMQSVSTSNFRLYMMVFAISLHSLFEGLSVGLLVKTQVLLQILVALLIHKSIISFSIGVQLVDADLPTSVVLICLAIFAAMAPLGVGLGMLLLKSLDKVIKTFISGILQGIATGTFLYVTFFEVLPHELNIVDRKLLKIMFVMLGYFVITGVCYFE 382
            N G +H     H       AS    + S  R  ++VF+++LHS+FEGL+VGL       +++ +ALL+HK I++ S+ ++L+ + L   VV  C  +F+ M PLG+GLG  L +S    +      +L+G+A GTFLY+TF E+LP EL   ++++LK++ ++ G+ ++TG+ + +
Sbjct:  153 NGGPQH----WHDGPGVPQASGAPATPSALRACVLVFSLALHSVFEGLAVGLQRDRARAMELCLALLLHKGILAVSLSLRLLQSHLRAQVVAGCGILFSCMTPLGIGLGAALAESAGP-LHQLAQSVLEGMAAGTFLYITFLEILPQELASSEQRILKVILLLAGFALLTGLLFIQ 323
The following BLAST results are available for this feature:
BLAST of TCONS_00067889-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S39A11.909e-3035.23Zinc transporter ZIP1 OS=Homo sapiens GN=SLC39A1 P... [more]
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