TCONS_00067631-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00067631-protein
Unique Name	TCONS_00067631-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1053

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00067631-protein ID=TCONS_00067631-protein|Name=TCONS_00067631-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1053bp
MADVEHKQKSKSSKKPIKNIITKPKNNLPKEELIEKFSLQEVLTLGGDKD
DFERLMNIDENDDNIVDDNTVDIGNLQNEIGSLIKELGFEKIIKEESNQQ
NDTNETNNNNLDKTLEKESSKESTKKKDKKKMENDKESKEEDETVSIKEE
EINFDIEEILKKYPLVAYDKILLKDCVPWHDQVSKIPKQQSKLPGDQINS
ISNRIEDYWNKEVELYQKVKDKDTSSDAQWLSTVLKSGTLSDKTAALTML
TQESPIHCMRSLDALMSLAKKKARREALIAVDSLRHLWISDLLPPVKLRK
FQQFPVENITSYAEGSKSELKMLIVMFYEDKLKSVYQEFLEIIKTLSKDP
LVNIRTKILGIIFELLIMKPEQEQTLLGMLINKLGDPEKAVASKASYLLL
QLVMKHPNMKNIVITEVERMMFRPNVGLKAQYYACCFLNQIPLSHEIKTL
ASKLVSLYFSFFKILVNKQGQSTDIQITKLLSALLTGVNRAFPYTEGAEE
TYEEQLNTLFKLAHSKHLGTSIQAFMLIYHVMESKQTVSDRFYQALYEKL
VDPELKTSSKQAMLLNLIFKAVRDDPILKRIKTFVKRLLQVSSQSQPSFL
CGILFLLSEVVKKKQGIKSMFNQPEDDDEDEEHFKDVILEAEEEEAGDET
KEKDDEKDVIEDSKEEKTGPSWTFRATNKDTTHYNIHARNPLYAGAEYTC
AWELTSISNHFHPSAQHFADSLLKGEDIVYKGDPLDDFTLLRFLDRFMYR
NPKKHDVEHGHSLMQRQKHSARLKEQPVNSTQFLQHSEDNVRQDELFFLR
YFKMKDEESSNKKKVKEEDEDEEDDEDIDQFGDIDFASEMKKNKGKKPTT
EEEEGEENEDGDDESESGDEFNYDDMMEEESDFDDSDLENGGGKKNFTDK
DYEDALFSQLNSDGESIDGEDGDGGDLDEEERMNEMLLGDAAADDDGDEE
GSGFAGGKSRSKKRKRDEPMFASAEEFAHLLEKGEENTGDYAESVHPKQR
KWEEKQQTKRSWNNKKPRGGHAGGGRGGHKGGNDRGPRKPFGNKNRRGGK
AKR

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_042240	XLOC_042240	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00067631	TCONS_00067631	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005612	CCAAT-binding_factor
IPR011989	ARM-like
IPR016024	ARM-type_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005488	binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 639..659
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 641..676
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 809..1053
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 96..145
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 758..787
IPR005612	CCAAT-binding factor	PFAM	PF03914	CBF	coord: 521..719 e-value: 9.6E-50 score: 168.8
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 208..831 e-value: 1.4E-13 score: 49.8
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 333..612 coord: 259..274

Blast

[Close]

BLAST of TCONS_00067631-protein vs. Swiss-Prot (Human)
Match: CEBPZ (CCAAT/enhancer-binding protein zeta OS=Homo sapiens GN=CEBPZ PE=1 SV=3)

HSP 1 Score: 580.096 bits (1494), Expect = 0.000e+0
Identity = 374/1034 (36.17%), Postives = 582/1034 (56.29%), Query Frame = 0

Query:   37 FSLQEVLTLGGDKDDFERLMNIDENDDNIVDDNTVDIGNLQ-NEIGSLIKELGFEKIIKEESNQQNDTNETNNNN-----LDKTLEKESSKESTKKKDKKKMENDKES-KEEDETVSIKEEEINFDIEEILKKYPLVAYDKILLKDCVPWHDQVSKIPKQQSKLPGDQINSISNRIEDYWNKEVELYQKVKDKDTSSDAQWLSTVLKSGTLSDKTAALTMLTQESPIHCMRSLDALMSLAKKK-ARREALIAVDSLRHLWISDLLPP-VKLRKFQQFPVENITSYAEGSK-SELKMLIVMFYEDKLKSVYQEFLEIIKTLSKDPLVNIRTKILGIIFELLIMKPEQEQTLLGMLINKLGDPEKAVASKASYLLLQLVMKHPNMKNIVITEVERMMFRPNVGLKAQYYACCFLNQIPLSHEIKTLASKLVSLYFSFFKILVNKQGQSTDIQITKLLSALLTGVNRAFPYTEGAEETYEEQLNTLFKLAHSKHLGTSIQAFMLIYHVMESKQTVSDRFYQALYEKLVDPELKTSSKQAMLLNLIFKAVRDDPILKRIKTFVKRLLQVSSQSQPSFLCGILFLLSEVVKKKQGIKSMF-NQPEDDDEDEEHFKDVILEAEEEEAGDETKEKDDEKDVIEDSKEEKTGP------------SWTF---RATNKDTTHYNIHARNPLYAGAEYTCAWELTSISNHFHPSAQHFADSLLKGEDIVYKGDPLDDFTLLRFLDRFMYRNPKKHDVEHG--HSLMQ-RQKHSAR-LKEQPVNSTQFLQHSEDNVRQDELFFLRYFKMKDEESSNKKKVKEEDEDEEDDED------------IDQF----------GDIDFASEMKK-NKGKKPTTEEEEGEENEDGDDESESGDEFNYDDMMEEESDFDDSDLENGGGKKNFTDKDYEDALFSQLNSDGESIDGEDGDGGDLDEEERMNEMLLGDAAADDDGDEEGS---GFAGGKSRSKKRKR---DEPMFASAEEFAHLLEKGE----ENTGDYA----ESVHPKQRKWE 1003
            FSL+EVL LGG K D+  L  +DEN++ I       I +LQ  E+ + I+ L   K  K    ++++  E  N++     + K   K +++      +K K +N  E   +E+ + + K ++   +I E  ++  L      LL+    W+D            P D ++      +  +  E+ L++   +    + + W+  ++ SGTL D+ AA+ +L Q+  +H ++ ++ L++L KKK ++++ L+A+D+ + L I+DLLP   KLR F Q P + +   + G+K S  + LI+ ++E +LK +  EF+++++TLS D LV  +T+ L +  ELL  KPE+E+ LL  ++NKLGDP+  +A+KAS+LL  L+ KHPNMK +V  EVER++FR N+  KAQYYA CFLNQ+ LSHE   LA+KL+++YF FF+  V K+    D++ +K+LSALLTGVNRA+PY++  ++   EQ++TLFK+ H  +  TS+QA ML++ VM S+QT+SDR+Y ALY K++DP L T SKQAM LNL++K+++ D +L+R+K FVKRLLQV+ Q  P F+CG L+L+SE++K K G++S   + PE D  DEE+F    ++A ++E  ++  + D E ++++  + E+T P            SW         K    Y+  +RNPL+ GAE T  WEL  +S HFHPS   FA ++L+G  I Y GDPL DFTL+RFLDRF+YRNPK H  +      +MQ ++KH  + ++  PVNS +FL   E  +  DE+FF RY+K        K  VKE+ + + D+E             ID F           D+DFA  +KK  KG K  T +E+ E ++D                  E  + DD ++  G           +D  F++++ DG    G   D  D DE E + E+ +    +      +G+    FAG     +K+KR   D  +F SAEEF HLL++      +N G  A    ++   KQ +WE
Sbjct:   40 FSLEEVLRLGGTKQDYLMLATLDENEEVIDGGKKGAIDDLQQGELEAFIQNLNLAKYTKASLVEEDEPAEKENSSKKEVKIPKINNKNTAESQRTSVNKVKNKNRPEPHSDENGSTTPKVKKDKQNIFEFFERQTL------LLRPGGKWYDLEYSNEYSLKPQPQDVVSKYKTLAQKLYQHEINLFKSKTNSQKGASSTWMKAIVSSGTLGDRMAAMILLIQDDAVHTLQFVETLVNLVKKKGSKQQCLMALDTFKELLITDLLPDNRKLRIFSQRPFDKLEQLSSGNKDSRDRRLILWYFEHQLKHLVAEFVQVLETLSHDTLVTTKTRALTVAHELLCNKPEEEKALLVQVVNKLGDPQNRIATKASHLLETLLCKHPNMKGVVSGEVERLLFRSNISSKAQYYAICFLNQMALSHEESELANKLITVYFCFFRTCVKKK----DVE-SKMLSALLTGVNRAYPYSQTGDDKVREQIDTLFKVLHIVNFNTSVQALMLLFQVMNSQQTISDRYYTALYRKMLDPGLMTCSKQAMFLNLVYKSLKADIVLRRVKAFVKRLLQVTCQQMPPFICGALYLVSEILKAKPGLRSQLDDHPESD--DEENF----IDANDDEDMEKFTDADKETEIVKKLETEETVPETDVETKKPEVASWVHFDNLKGGKQLNKYDPFSRNPLFCGAENTSLWELKKLSVHFHPSVALFAKTILQGNYIQYSGDPLQDFTLMRFLDRFVYRNPKPHKGKENTDSVVMQPKRKHFIKDIRHLPVNSKEFLAKEESQIPVDEVFFHRYYK--------KVAVKEKQKRDADEESIEDVDDEEFEELIDTFEDDNCFSSGKDDMDFAGNVKKRTKGAKDNTLDEDSEGSDD------------------ELGNLDDDEVSLGS---------MDDEEFAEVDEDG----GTFMDVLD-DESESVPELEVHSKVSTKKSKRKGTDDFDFAGSFQGPRKKKRNLNDSSLFVSAEEFGHLLDENMGSKFDNIGMNAMANKDNASLKQLRWE 1016

The following BLAST results are available for this feature:

BLAST of TCONS_00067631-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00067631-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CEBPZ	0.000e+0	36.17	CCAAT/enhancer-binding protein zeta OS=Homo sapien...	[more]

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TCONS_00067631-protein (polypeptide) - C. hemisphaerica