TCONS_00067629-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00067629-protein
Unique NameTCONS_00067629-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length202

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00067629-protein ID=TCONS_00067629-protein|Name=TCONS_00067629-protein|organism=Clytia hemisphaerica|type=polypeptide|length=202bp
MFTLLRGLWKYLFQKDEYCILIVGLDNAGKTTFLEQTKRKYATKAYNGIP
FEKIGPTVGMNIGKIDLKSDVLLLWDLGGQEELQSLWDKYFLDCNGVIYV
IDSSDSPRLGESYECFRNLLTHSDLEGIPLLVLANKQDKPSCITVDEVKE
VFNKSAAFLGKRDCMLHGISALDGTGVDDGLQWMLEHVKRNYNRPPREKD
IR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042238XLOC_042238Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00067629TCONS_00067629Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005225Small_GTP-bd_dom
IPR006689Small_GTPase_ARF/SAR
IPR024156Small_GTPase_ARF
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
Vocabulary: Biological Process
TermDefinition
GO:0007264small GTPase mediated signal transduction
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007264 small GTPase mediated signal transduction
cellular_component GO:0005622 intracellular
molecular_function GO:0005525 GTP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 18..39
score: 26.04
coord: 126..139
score: 30.41
coord: 63..85
score: 32.49
NoneNo IPR availableSMARTSM00177arf_sub_2coord: 1..192
e-value: 3.0E-27
score: 106.5
NoneNo IPR availableSMARTSM00178sar_sub_1coord: 2..188
e-value: 1.3E-8
score: 44.6
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 18..191
e-value: 1.3E-4
score: -52.3
NoneNo IPR availableGENE3D3.40.50.300coord: 3..194
e-value: 1.9E-42
score: 144.1
NoneNo IPR availableCDDcd04160Arfrp1coord: 19..184
e-value: 4.4383E-87
score: 255.73
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 17..178
e-value: 2.0E-14
score: 51.7
IPR006689Small GTPase superfamily, ARF/SAR typePFAMPF00025Arfcoord: 11..187
e-value: 5.4E-43
score: 146.4
IPR024156Small GTPase superfamily, ARF typePROSITEPS51417ARFcoord: 11..188
score: 19.333
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 14..192

Blast
[Close]
BLAST of TCONS_00067629-protein vs. Swiss-Prot (Human)
Match: ARFRP (ADP-ribosylation factor-related protein 1 OS=Homo sapiens GN=ARFRP1 PE=1 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 3.789e-85
Identity = 113/201 (56.22%), Postives = 153/201 (76.12%), Query Frame = 0 
Query:    1 MFTLLRGLWKYLFQKDEYCILIVGLDNAGKTTFLEQTKRKYATKAYNGIPFEKIGPTVGMNIGKIDLKSDVLLLWDLGGQEELQSLWDKYFLDCNGVIYVIDSSDSPRLGESYECFRNLLTHSDLEGIPLLVLANKQDKPSCITVDEVKEVFNKSAAFLGKRDCMLHGISALDGTGVDDGLQWMLEHVKRNYNRPPREKDI 201
            M+TLL GL+KY+FQKDEYCILI+GLDNAGKTTFLEQ+K ++  K Y G+   KI  TVG+NIG +D+    L+ WDLGGQEELQSLWDKY+ +C+GVIYVIDS+D  RL ES + F  ++T   L G+P+LVLANKQD  +C+++ ++K  F+   + +G+RDC+    SAL G GV +G++WM++ V RN +RPPR++DI
Sbjct:    1 MYTLLSGLYKYMFQKDEYCILILGLDNAGKTTFLEQSKTRF-NKNYKGMSLSKITTTVGLNIGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEKVVTSEALCGVPVLVLANKQDVETCLSIPDIKTAFSDCTSKIGRRDCLTQACSALTGKGVREGIEWMVKCVVRNVHRPPRQRDI 200
The following BLAST results are available for this feature:
BLAST of TCONS_00067629-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ARFRP3.789e-8556.22ADP-ribosylation factor-related protein 1 OS=Homo ... [more]
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