TCONS_00067575-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00067575-protein
Unique NameTCONS_00067575-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length478

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00067575-protein ID=TCONS_00067575-protein|Name=TCONS_00067575-protein|organism=Clytia hemisphaerica|type=polypeptide|length=478bp
RCYKNKKKSRKKMITPLFKIRQDDDNLLIDIYAKFVKANDVEIYVEGNMF
KFYVKPYFLRLNLPGKLCEECEESGKYDVGEGIFQFKLKKATPGEFFQDL
DMITTLMATRKELQIPLIEEISTDLEKKLKVSEEEEHEEEKEEEDWDWCQ
QTSSQNVEDLTGKYKYGFANSFQDALSKFQEETEEFIDIPSPDTTSHAER
RKLRIHHENNHFNVEHYMADYVEWDNMSSLVNFAPPWLSKMKNSEEKNEH
FDMLHFTDEEEKMLTLLPNKDYLLSSLDERKCLLSLVDLLFAYCYDHRTT
EGENTSESPWTICKLSSTLSWFDSFQTIDEVVVNCCRRALCYPLYRNWQL
ILIIWNDVKEIMMAGKVCIIKCLLDMRGILMRDESRYILNELYVNHYIVW
VQKVSLQRLSSIAEALKEKDIQKEVVGFNLEQIESVFLNNNQDDISSSST
STEEDSSSEDEESDQSLDSDDEPTPPPP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042200XLOC_042200Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00067575TCONS_00067575Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007009SHQ1
IPR008978HSP20-like_chaperone
IPR007052CS_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 122..142
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 441..478
NoneNo IPR availableCDDcd06463p23_likecoord: 22..95
e-value: 6.47763E-5
score: 39.9626
IPR007009SHQ1 proteinPFAMPF04925SHQ1coord: 254..424
e-value: 7.8E-63
score: 211.1
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 2..111
e-value: 3.4E-17
score: 62.0
IPR008978HSP20-like chaperoneSUPERFAMILY49764HSP20-like chaperonescoord: 15..94
IPR007052CS domainPROSITEPS51203CScoord: 13..101
score: 11.607

Blast
[Close]
BLAST of TCONS_00067575-protein vs. Swiss-Prot (Human)
Match: SHQ1 (Protein SHQ1 homolog OS=Homo sapiens GN=SHQ1 PE=1 SV=2)

HSP 1 Score: 328.946 bits (842), Expect = 8.161e-107
Identity = 169/422 (40.05%), Postives = 254/422 (60.19%), Query Frame = 0 
Query:   13 MITPLFKIRQDDDNLLIDIYAKFVKANDVEIYVEGNMFKFYVKPYFLRLNLPGKLCEECEESGKYDVGEGIFQFKLKKATPGEFFQDLDMITTLMATRKELQI-PLIEEISTDLEKKLKVSEEEEHEEEKEEEDWDW-CQQTSSQNVED--LTGKYKYGFANSFQDALSKFQEETEEFIDIPSPDTTSHAERRKLRIHHENNHFNVEHYMADYVEWDNMSSLVNFAPPWLSK-------MKNSEEKNEHFDMLHFTDEEEKMLTLLPNKDYLLSSLDERKCLLSLVDLLFAYCYDHRTTEGENTSESPWTICKLSSTLSWFDSFQTIDEVVVNCCRRALCYPLYRNWQLILIIWNDVKEIMMAGKVCIIKCLLDMRGILMRDESRYILNELYVNHYIVWVQKVSLQRLSSIAEALKEKDIQK 423
            M+TP F + QD D L I I   + + ++ ++Y EG+ FKFY KPYFLRL LPG++ E   E G YD  +GIF  +L K TPG+ F+ L+M+T L+A RK     PL+EEI             E  EE  ++E++DW  +QT  + V +  L  +  YGF N     L + Q+E  + IDI  PD T  AERR+ R+  E   F+ +HY+AD+ E + +  ++ + P W  K       ++ S+E+  H  ++ F++EE+  L    NK YLL     R+   SL+D+L AYCY+ R TEGE   ES W I KLS TL WF+++  + +++V+  RR LCYPLYR+++L++  + D  +I+  GK  ++KCLLD+  I   ++  YILN+LY++ Y VW+QKV  ++L+++AEALKE  + K
Sbjct:    1 MLTPAFDLSQDPDFLTIAIRVPYARVSEFDVYFEGSDFKFYAKPYFLRLTLPGRIVENGSEQGSYDADKGIFTIRLPKETPGQHFEGLNMLTALLAPRKSRTAKPLVEEIGAS----------EIPEEVVDDEEFDWEIEQTPCEEVSESALNPQCHYGFGNLRSGVLQRLQDELSDVIDIKDPDFTPAAERRQKRLAAELAKFDPDHYLADFFEDEAIEQILKYNPWWTDKYSKMMAFLEKSQEQENHATLVSFSEEEKYQLRKFVNKSYLLDKRACRQVCYSLIDILLAYCYETRVTEGEKNVESAWNIRKLSPTLCWFETWTNVHDIMVSFGRRVLCYPLYRHFKLVMKAYRDTIKILQLGKSAVLKCLLDIHKIFQENDPAYILNDLYISDYCVWIQKVKSKKLAALAEALKEVSLTK 412
The following BLAST results are available for this feature:
BLAST of TCONS_00067575-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SHQ18.161e-10740.05Protein SHQ1 homolog OS=Homo sapiens GN=SHQ1 PE=1 ... [more]
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