TCONS_00067562-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00067562-protein
Unique NameTCONS_00067562-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length754

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00067562-protein ID=TCONS_00067562-protein|Name=TCONS_00067562-protein|organism=Clytia hemisphaerica|type=polypeptide|length=754bp
MADQVVTAAAMVEHLNDHIIGKLNEHIVEKLNEEIHTEETMTTVEAVVVG
EEAAELVIQHQPQESIPPDEIPPTQIVSEEQMIVSTVEGGEKQNEEAVEQ
DDERHIEITIGDPVADKVIDSCVGTDNRRYYKVKWQATWEPEDELLVKYQ
NLIEDYWKVTVQEQNELEHKNLINNLFENVTPGEGNEDIKPNIDKLNGGK
RSGEAEPPDNGGGGGEQTVQDTNGERADDHENALTAYKQVNSPEHKISDE
PVLITDSKPPPLKNVEKVTDELPHKCDECTRSYSTLRKLKDHQRKLHTNL
GLYQCSECPKQFNTKRSLQMHMNRHTGIGPHACPGCGKRYMTPQELVFHK
RSCNGLVDKEFTCEQCGKRFATKTHLVFHMKIHLPDDEKPFKCQFCTRTF
AYNHDCVHHMRLHLGEKPYKCTECDKAFHRKSYLTEHMFVHTGISKYQCE
TCKQYFRTQQMLQTHVKNIHILKKTAKTPRARNARPNDKSPAKRNTKKKY
RCEDCDKEFKFVKEYHFHCAVNHKGSKLMMEEGREEEVLADFEPTMVYKC
RHCEKSFRYVSLLKKHAETHKLDRGDGEHDKGNESEKENQQEGGVQDVDE
PMNDEDCEKVSMKESAADENVVEEIHIAATEEGEPQTALIEQGDDQVTVC
YVTHKDVLDNVEELNILACGHCLAGFTDEEQLNQHVLSEHSDLILQSEEI
AVEHVTTAETSEEHDGTQQVQLHDGSLHVLDGSEGMKIIQLALEAKXDPQ
ILRS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042192XLOC_042192Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00067562TCONS_00067562Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000953Chromo/chromo_shadow_dom
IPR013087Znf_C2H2_type
IPR013083Znf_RING/FYVE/PHD
IPR016197Chromodomain-like
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000953Chromo/chromo shadow domainSMARTSM00298chromo_7coord: 112..161
e-value: 0.0059
score: 25.8
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 500..523
e-value: 10.0
score: 13.3
coord: 419..441
e-value: 4.0E-4
score: 29.7
coord: 391..413
e-value: 1.7
score: 17.6
coord: 331..351
e-value: 69.0
score: 5.8
coord: 667..690
e-value: 0.77
score: 18.8
coord: 361..383
e-value: 2.4E-4
score: 30.4
coord: 447..470
e-value: 0.0064
score: 25.7
coord: 303..325
e-value: 3.7E-5
score: 33.1
coord: 548..570
e-value: 0.051
score: 22.7
coord: 274..297
e-value: 0.047
score: 22.8
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 393..413
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 305..325
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 449..470
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 421..441
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 502..523
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 550..570
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 669..690
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 363..383
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 276..297
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 447..475
score: 11.157
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 391..418
score: 13.651
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 500..528
score: 9.598
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 303..330
score: 13.588
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 361..388
score: 13.318
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 548..575
score: 12.009
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 274..299
score: 10.72
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 419..446
score: 13.817
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 413..465
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 269..306
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 370..428
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 297..349
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 547..570
coord: 662..686
NoneNo IPR availableGENE3D2.20.28.10coord: 224..278
e-value: 0.015
score: 14.6
NoneNo IPR availableGENE3D3.30.160.60coord: 309..320
e-value: 7.5E-8
score: 31.8
NoneNo IPR availableGENE3D3.30.160.60coord: 559..691
e-value: 1.2E-7
score: 31.2
coord: 342..370
e-value: 5.8E-11
score: 41.9
NoneNo IPR availablePFAMPF13894zf-C2H2_4coord: 361..383
e-value: 6.2E-4
score: 20.3
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 274..297
e-value: 0.0063
score: 16.8
coord: 419..441
e-value: 3.3E-4
score: 20.8
coord: 447..470
e-value: 0.0062
score: 16.8
coord: 303..325
e-value: 9.5E-5
score: 22.6
coord: 548..570
e-value: 0.0019
score: 18.4
NoneNo IPR availableGENE3D2.20.25.10coord: 294..308
e-value: 0.14
score: 11.7
coord: 498..508
e-value: 0.053
score: 13.1
NoneNo IPR availableGENE3D3.30.160.60coord: 509..558
e-value: 3.0E-7
score: 30.2
coord: 432..457
e-value: 9.6E-14
score: 51.0
NoneNo IPR availableGENE3D3.30.160.60coord: 399..410
e-value: 0.0073
score: 15.8
NoneNo IPR availableGENE3D2.40.155.10coord: 371..398
e-value: 1.5E-13
score: 50.8
NoneNo IPR availableGENE3D3.30.160.60coord: 279..293
e-value: 4.3E-5
score: 22.8
NoneNo IPR availableGENE3D2.40.50.40coord: 111..160
e-value: 8.2E-7
score: 28.1
NoneNo IPR availableGENE3D3.30.160.60coord: 411..431
e-value: 6.2E-16
score: 57.7
coord: 321..341
e-value: 6.9E-9
score: 35.1
NoneNo IPR availableCDDcd00024CHROMOcoord: 111..158
e-value: 1.30482E-5
score: 42.6363
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 458..497
e-value: 0.016
score: 14.8
IPR016197Chromo domain-likeSUPERFAMILY54160Chromo domain-likecoord: 113..159

Blast
BLAST of TCONS_00067562-protein vs. Swiss-Prot (Human)
Match: ZN724 (Zinc finger protein 724 OS=Homo sapiens GN=ZNF724 PE=2 SV=3)

HSP 1 Score: 167.933 bits (424), Expect = 5.657e-44
Identity = 114/323 (35.29%), Postives = 153/323 (47.37%), Query Frame = 0
Query:  271 ELPHKCDECTRSYSTLRKLKDHQRKLHTNLGLYQCSECPKQFNTKRSLQMHMNRHTGIGPHACPGCGKRYMTPQELVFHKRSCNGLVDKEFTCEQCGKRFATKTHLVFHMKIHLPDDEKPFKCQFCTRTFAYNHDCVHHMRLHLGEKPYKCTECDKAFHRKSYLTEHMFVHTGISKYQCETCKQYFRTQQMLQTHVKNIHILKKTAKTPRARNARPNDKSPAKRNT----KKKYRCEDCDKEFKFVKEYHFHCAVNHKGSKLMMEEGREEEVLADFEPTMV-------------YKCRHCEKSFRYVSLLKKHAETHKLDRGD 576
            E P+ C+ C R+++    L  H+R +HT    Y+C EC K FN   +L  H   HTG  P+ C  CGK +     L  HKR   G  +K + CE+CGK F T +HL  H +IH    EKP+KC+ C + F        H  +H GEKPYKC EC KAF R S LTEH  +HTG   Y+CE C + F     L TH K IH  +K  K      A     + A+       +K Y+CE+C K F     Y +     HK      +  + EE    F  +               YKC+ C K+F   S L  H + H +++ D
Sbjct:  307 EKPYICEHCGRAFNQSSNLTKHKR-IHTGDKPYKCEECGKAFNVSSTLTQHKRIHTGEKPYKCEECGKAFNVSSTLTQHKRIHTG--EKPYKCEECGKAFNTSSHLTTHKRIH--TGEKPYKCEECGKAFNQFSQLTTHKIIHTGEKPYKCKECGKAFKRSSNLTEHRIIHTGEKPYKCEECGKAFNLSSHLTTH-KKIHTGEKPYKCKECGKAFNQSSTLARHKIIHAGEKPYKCEECGKAF-----YQYSNLTQHKIIHTGEKPYKCEECGKAFNWSSTLTKHKVIHTGEKPYKCKECGKAFNQCSNLTTHKKIHAVEKSD 618          

HSP 2 Score: 145.976 bits (367), Expect = 1.350e-36
Identity = 98/285 (34.39%), Postives = 141/285 (49.47%), Query Frame = 0
Query:  226 RADDHENALTAYKQVNSPEHKISDEPVLITDSKPPPLKNVEKV-TDELPHKCDECTRSYSTLRKLKDHQRKLHTNLGLYQCSECPKQFNTKRSLQMHMNRHTGIGPHACPGCGKRYMTPQELVFHKRSCNGLVDKEFTCEQCGKRFATKTHLVFHMKIHLPDDEKPFKCQFCTRTFAYNHDCVHHMRLHLGEKPYKCTECDKAFHRKSYLTEHMFVHTGISKYQCETCKQYFRTQQMLQTHVKNIHILKKTAKTPRARNARPNDKSPAKRNTKKKYRCEDCDKEF 509
            +A +  + LT +K++++ E     E      +    L   +++ T E P+KC+EC ++++T   L  H+R +HT    Y+C EC K FN    L  H   HTG  P+ C  CGK +     L  H+    G  +K + CE+CGK F   +HL  H KIH    EKP+KC+ C + F  +     H  +H GEKPYKC EC KAF++ S LT+H  +HTG   Y+CE C + F     L  H K IH    T + P                    Y+C++C K F
Sbjct:  345 KAFNVSSTLTQHKRIHTGEKPYKCEECGKAFNVSSTLTQHKRIHTGEKPYKCEECGKAFNTSSHLTTHKR-IHTGEKPYKCEECGKAFNQFSQLTTHKIIHTGEKPYKCKECGKAFKRSSNLTEHRIIHTG--EKPYKCEECGKAFNLSSHLTTHKKIH--TGEKPYKCKECGKAFNQSSTLARHKIIHAGEKPYKCEECGKAFYQYSNLTQHKIIHTGEKPYKCEECGKAFNWSSTLTKH-KVIH----TGEKP--------------------YKCKECGKAF 599          

HSP 3 Score: 137.502 bits (345), Expect = 8.289e-34
Identity = 119/400 (29.75%), Postives = 175/400 (43.75%), Query Frame = 0
Query:  215 GEQTVQDTNGERADD----HENALTAYKQ-VNSPEHKISDEPVLITDSKPPPLKNVEKVTDELPHKCDECTRSYSTLRKLKDHQRKLHTNLGLYQCSECPKQFNTKRSLQMHMNRHTGIGPHACPGCGKRYMTPQELVFHKRSCNGLVDKEFTCEQCGKRFATKTHLVFHMKIHLPDD--------------------------EKPFKCQFCTRTFAYNHDCVHHMRLHLGEKPYKCTECDKAFHRKSYLTEHMFVHTGISKYQCETCKQYFRTQQMLQTHVKNIHILKKTAK---TPRARNARPNDKSPAKRNTKKK-YRCEDCDKEFKFVKEYHFHCAVNHKGSK--LMMEEGREEEVLADFEPTMV-------YKCRHCEKSFRYVSLLKKHAETH 570
            G   +Q   G ++ D    H+ +   + Q + + + KI      + D       N  K T++ P KC EC +S+  L  L  H+R +HT +  Y+  EC K FN   +L  H   HTG   + C  CG  +     L  HK    G  +K +  E+CGK F   +HL  H  IH  ++                          EKP+ C+ C R F  + +   H R+H G+KPYKC EC KAF+  S LT+H  +HTG   Y+CE C + F     L  H K IH  +K  K     +A N   +  +  + +T +K Y+CE+C K F    +   H  + H G K     E G+  +  ++     +       YKC  C K+F   S L  H + H
Sbjct:  107 GHHNLQLKKGYKSVDEYKVHKGSYNGFNQCLTTTQSKIFQCDKYVKDFHKFSNSNRHK-TEKNPFKCKECGKSFCVLSHLTQHKR-IHTTVNSYKLEECGKAFNVSSTLSQHKRIHTGQKHYKCEECGIAFNKSSHLNTHKIIHTG--EKSYKREECGKAFNISSHLTTHKIIHTGENAYKCKECGKAFNQSSTLTRHKIIHAGEKPYICEHCGRAFNQSSNLTKHKRIHTGDKPYKCEECGKAFNVSSTLTQHKRIHTGEKPYKCEECGKAFNVSSTLTQH-KRIHTGEKPYKCEECGKAFNTSSHLTTHKRIHTGEKPYKCEECGKAFNQFSQLTTH-KIIHTGEKPYKCKECGKAFKRSSNLTEHRIIHTGEKPYKCEECGKAFNLSSHLTTHKKIH 500          

HSP 4 Score: 136.732 bits (343), Expect = 1.607e-33
Identity = 109/315 (34.60%), Postives = 150/315 (47.62%), Query Frame = 0
Query:  269 TDELPHKCDECTRSYSTLRKLKDHQRKLHTNLGLYQCSECPKQFNTKRSLQMHMNRHTGIGPHACPGCGKRYMTPQELVFHKRSCNGLVDKEFTCEQCGKRFATKTHLVFHMKIHLPDDEKPFKCQFCTRTFAYNHDCVHHMRLHLGEKPYKCTECDKAFHRKSYLTEHMFVHTGISKYQCETCKQYFRTQQMLQTHVKNIHILKKTAK---TPRARNARPNDKSPAKRNTKKK-YRCEDCDKEFKFVKEYHFHCAVNHKGSK-LMMEEGREEEVLADFEPT--------MVYKCRHCEKSFRYVSLLKKHAETH 570
            T +  +KC+EC  +++    L  H + +HT    Y+  EC K FN    L  H   HTG   + C  CGK +     L  HK    G  +K + CE CG+ F   ++L  H +IH  D  KP+KC+ C + F  +     H R+H GEKPYKC EC KAF+  S LT+H  +HTG   Y+CE C + F T   L TH K IH  +K  K     +A N      +    +T +K Y+C++C K FK       H  + H G K    EE  +   L+    T          YKC+ C K+F   S L +H   H
Sbjct:  221 TGQKHYKCEECGIAFNKSSHLNTH-KIIHTGEKSYKREECGKAFNISSHLTTHKIIHTGENAYKCKECGKAFNQSSTLTRHKIIHAG--EKPYICEHCGRAFNQSSNLTKHKRIHTGD--KPYKCEECGKAFNVSSTLTQHKRIHTGEKPYKCEECGKAFNVSSTLTQHKRIHTGEKPYKCEECGKAFNTSSHLTTH-KRIHTGEKPYKCEECGKAFNQFSQLTTHKIIHTGEKPYKCKECGKAFKRSSNLTEH-RIIHTGEKPYKCEECGKAFNLSSHLTTHKKIHTGEKPYKCKECGKAFNQSSTLARHKIIH 528          
The following BLAST results are available for this feature:
BLAST of TCONS_00067562-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN7245.657e-4435.29Zinc finger protein 724 OS=Homo sapiens GN=ZNF724 ... [more]
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