TCONS_00067480-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00067480-protein
Unique NameTCONS_00067480-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1525

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00067480-protein ID=TCONS_00067480-protein|Name=TCONS_00067480-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1525bp
LIWTQFNQGCYVHTQFVDRGNGLNFHNCWVFSKCKSSPSFTRTFYSPPVY
IGDKMNTTGCQYKTLFTRGIQFYEVKNEMEYNIIENKSMDMTWHDDHYLV
TYVLDNNSTILTKELRANFSCVVKYVHLNKTETTISEVAFHDVRSNDVRF
MTKPTLYRTHNETIVKGCQFTTANVESAVSNGFIRYNQTAHYVGSTLSFE
NDKGILSFPEWKFPYRINSGDFWCVVRVGFPVVLEEFVSNSSMLYKEPEF
LDEPELERLSFEGVEISGCRFKYHQEPSTGFLVILDDDRTPMARINTTFS
RLGSGGNDVYEMTSIVIVSYDVMGSYFYCEINDGAKRTISNISAEIEVAL
PSFISGPSAAEESYFTGSAFTMDGCSFNTTFIKGFTLTTITPNGRQVVEL
KDQMFVWTGDIFEVQLDQIEYGNITTNVSGLYSCRIDGMHNNKTFRIESE
SYRVHIEESDVYFTSNPIIQTTLTTTNINGCTYKSARNESLLQHSYIAVN
GTLLQKVNALTISSGESSINGRFYFPNTTLPYKLQQSDVTCVIVLGTDRY
ESNATMVYNHPEFITIPKALNPKQEGVAITGCSFKYHQLLQGDAFFSILD
SNMNTNSRIPTTIVKSKERDVYEFASAMMESYKDLGSFIRCSLFDSKDMM
EPVISQKSNKTRFTLPTFVNGPSTKQTSLLVGDDVIIEGCNFTTLFTGDL
RMSLHHNNRFISNVSTDDFKWNVDSFLVQPDESEIRMRTNSSGNYTCRIE
FLFENQTRSVESPVLNLKVYGNNVTFTSTPKLERSSTNTTIGGCQYTSNQ
GTDLIKHAYIKFNGTLYSYPEDSSSGLSGDSELVLPALTFQYYIEEGFFS
CVIKIEDETFESEAAELYQKPEFSVLPNQKSTIERGIKLRGCRFKYHQLL
RSSDANVSFEIYGSKSVFLKSLPSYVVENTDLKDGYLFHLSYLTTYDVLG
GFAKCKISMRDEDIFSDRSQTFSFSAPSILQQPVPTQPSFYIGETITIQN
CQFNSTLDKDIEIYYLKDDTVIQTARFNSTWMNGTFTIDVEDFVAQANNT
ADSGAYRCRLQSISNSSLYVESGPATITVKSNDVTFQSRPVIQRTLQQTF
VSRCQYSSAGNRNLTQYLFTKSEKGLVRATNHSSMFDGSEPGTIFNEPIT
DGDFSCVIKIGDETFESNSSKLYAEIEFQSIPTTTLNTRNAITITGCQFK
YHQVSSSKDVYSFTIYDQNNTFIKELPTTITPSTRAENDTYTFDSITVNS
YEDLGTFIRCHVFDPLEMKVSNFSKASLPVNVQLPSAMVHPNSTSQTYHT
GQNISITHCMFSSMFTENITISLVKDGSPLIQNVAFRFSWSISIGSYSLT
TEHFLLVNVGSENSGRYWCVLRYNQTMKVRTKQLPIFVNQFDVEIKNRPS
LTRTLSNTTISGCVYVSFLNESLMQYLYIRRDETLIKVSEDVSTLPYTTS
NQIFTFPSLTINENISTGNFSCVIQTVRETITSNYSLLYESPVYKNVPEM
QSIQPNGVTVSGCQFQFHQDLKGFX
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042143XLOC_042143Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00067480TCONS_00067480Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
IPR007110Ig-like_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
ZOOM
x 1
POSITION
0
200400600800100012001400SequenceG3DSA:2.60.40.10G3DSA:2.60.40.10G3DSA:2.60.40.10PS50835PS50835PS50835SSF48726
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 651..772
e-value: 0.01
score: 15.2
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 1278..1399
e-value: 3.2E-5
score: 23.3
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 968..1084
e-value: 7.1E-5
score: 22.3
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 1285..1385
score: 8.157
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 38..136
score: 6.669
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 977..1078
score: 8.085
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 1294..1386

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00067480-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
ZOOM
x 1
POSITION
0
200400600800100012001400Sequence
Match NameE-valueIdentityDescription
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