TCONS_00067330-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00067330-protein
Unique Name	TCONS_00067330-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1216

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00067330-protein ID=TCONS_00067330-protein|Name=TCONS_00067330-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1216bp
MKKGIHQAKKEYKLVHQILCVTFVDFQRQTLQGFVELHIQPLVPLLSRIK
LNCRQCRIYRVCIKGPGLDSWLEAAFLTDDPCAKIGTDSRKRNLDYFYSN
LQNAVNQTEPENDGGEITVRLPSETMPLVEDKKILRVSIEFVLDKPSSGI
HFCIPNGEGSFAKRNAHMFSYNWGNSSRLWFPCIDSLSEICTWKIEVTAD
PDMMVVSPGDLAEKIYTEDEKRITHHFTLTTPTSASNIGIAVGPFEVVSD
PEMSDVTYFVLPGLKPLVKNTTSFLAEAFEFFEETLNTQYPHSTFKLVFV
DEAYETSQVFQSLAILNTNLLHPPFIIEQPFETRRYLIESLAQQFFGMFV
SIQSWADLWLIRGISLYLTGLFVKKMFGNNEYRHWLMKEMETLCTYELDG
PSLAPLYPFPLAAVPLDGKYDSKHEIKQESLLKQHPHLISSEQLKMLETK
SHLIMRMVELRIGQDLLMQTFNKVLSLATSAAARRSDSSHWNSMLISTNG
FLKTISTVSGKDINVFVDQWICHTGVAKFNVSFSFNRKRNIIELEMTQYS
GKGCQKYVGPLIVCVQELDGSFSHTVQVEDTVSRHEIPCHSKSRRNKKKK
IPLITGEEVDMDLSATFDTDSPVLWVRVDPDMTWARRVIIQQPDYMWQYQ
LRYERDVTSQIEAVRALQKYPCIGTRNALVDILHQNEAFFRVRTECAQSL
AKVLIADTELSGEQTELIEIFEKMFGSKACASIPRYNDFSNFITYFIQKA
IPFALSNQRLDNTQCASFITKFILNLLKFNDXTQCASFITKFILNLLKFN
DNRTNHFSDGGYLSALIEALGNTIGPADNRITETTVKSSLPLNEEARAVL
SEVNRRLNMEKILSSFKYSVTCSCLKAIRRLQVTGHIPAESAFFRKYSQY
GLFEDIRLTALEILVDFVHVNSSEKDLDWLLDLVEKDPVPRIRHHIVMCL
TKSPPFEKKKSVDSVFNNLTLVERLWQLMNSDCTLEYRLRCSIMEFYSTL
WGRITPPCVPSHGFGVVIDLKEKKALSNITAPKAPASPEMGASVSAGEEG
TLAKKRRLSVEHFDDQMMDSFPGTPMSMCSEGSATNKIKLKIKLAGEETS
HDSGSDFLPPVKTNDPLGLSLLDDNESNSSKKVKKKKKKKHKHKDKNKDH
EKNSSKGLDLANTSLPGVNRELSLDDRLASANSPLSLSLSRTGEEFKPDN
VTEMMVDSDELSDMAL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_042077	XLOC_042077	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00067330	TCONS_00067330	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR014782	Peptidase_M1_N
IPR011989	ARM-like
IPR016024	ARM-type_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0008237	metallopeptidase activity
GO:0008270	zinc ion binding
GO:0005488	binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005488	binding
molecular_function	GO:0008237	metallopeptidase activity
molecular_function	GO:0008270	zinc ion binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 1133..1153
None	No IPR available	GENE3D	2.60.40.1730		coord: 2..245 e-value: 3.0E-38 score: 131.4
None	No IPR available	GENE3D	1.10.390.10		coord: 327..524 e-value: 1.5E-24 score: 86.4
None	No IPR available	SUPERFAMILY	63737	Leukotriene A4 hydrolase N-terminal domain	coord: 111..244 coord: 12..76
None	No IPR available	SUPERFAMILY	55486	Metalloproteases ("zincins"), catalytic domain	coord: 256..531
IPR014782	Peptidase M1, membrane alanine aminopeptidase, N-terminal	PFAM	PF01433	Peptidase_M1	coord: 268..391 e-value: 3.4E-6 score: 26.5
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 647..1014 e-value: 7.2E-6 score: 24.1
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 891..1001 coord: 679..823

Blast

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BLAST of TCONS_00067330-protein vs. Swiss-Prot (Human)
Match: TAF2 (Transcription initiation factor TFIID subunit 2 OS=Homo sapiens GN=TAF2 PE=1 SV=3)

HSP 1 Score: 973.77 bits (2516), Expect = 0.000e+0
Identity = 486/1028 (47.28%), Postives = 700/1028 (68.09%), Query Frame = 0

Query:    7 QAKKEYKLVHQILCVTFVDFQRQTLQGFVELHIQPLVPLLSRIKLNCRQCRIYRVCIKGPGLDSWLEAAFLTDDPCAKI-GTDSRKRNLDYFYSNLQNAVNQTEPENDGGEITVRLPSETMPLVEDKKILRVSIEFVLDKPSSGIHFCIPNGEGSFAKRNAHMFSYNWGNSSRLWFPCIDSLSEICTWKIEVTADPDMMVVSPGDLAEKIYTEDEKRITHHFTLTTPTSASNIGIAVGPFEVVSDPEMSDVTYFVLPGLKPLVKNTTSFLAEAFEFFEETLNTQYPHSTFKLVFVDEAYETSQVFQSLAILNTNLLHPPFIIEQPFETRRYLIESLAQQFFGMFVSIQSWADLWLIRGISLYLTGLFVKKMFGNNEYRHWLMKEMETLCTYEL--DGPSLAPLYPFPLAAVPLDGKYDSKHEIKQESLLKQHPHLISSEQLKMLETKSHLIMRMVELRIGQDLLMQTFNKVLSLATSAAARRSDSSHWNSMLISTNGFLKTISTVSGKDINVFVDQWICHTGVAKFNVSFSFNRKRNIIELEMTQ-YSGKGCQKYVGPLIVCVQELDGSFSHTVQVEDTVSRHEIPCHSKSRRNKKKKIPLITGEEVDMDLSATFDTDSPVLWVRVDPDMTWARRVIIQQPDYMWQYQLRYERDVTSQIEAVRALQKYPCIGTRNALVDILHQNEAFFRVRTECAQSLAKVLIADTELSGEQTELIEIFEKMFGSKACASIPRYNDFSNFITYFIQKAIPFALSNQRLDNTQCASFITKFILNLLKFNDXTQCASFITKFILNLLKFNDNRTNHFSDGGYLSALIEALGNTIGPADNRITETTVKSSLPLNEEARAVLSEVNRRLNMEKILSSFKYSVTCSCLKAIRRLQVTGHIPAESAFFRKYSQYGLFEDIRLTALEILVDFVHVNSSEKDLDWLLDLVEKDPVPRIRHHIVMCLTKSPPFEKKKSVDSVFNNLTLVERLWQLMNSDCTLEYRLRCSIMEFYSTLWGRITPPCVPSHGFGVVIDLKEKKALSNIT 1030
            ++ + YKL HQ++C+  ++FQR+++ GFVEL I P V  L+RIKLN +QCRIYRV I        LEAAF+ +DP  ++  ++S++RNL+YF +    AV+  +P+   GE+ +++PSE    V++ K+L++ I F LD+P  G+HF +P+ EGS A+R AH+FS  + NS+R WFPC+DS SE+CTWK+E T D  M+ VS GDL E +YT D ++ T H+ LT PT+ASNI +A+GPFE++ DP M +VT+F LP L PL+K+TTS+L E FEF+EE L  +YP+S FK VF+DEAY     + S++I +TNLLH   II++   TRR L +SLAQQFFG F+S  SW+D W+++GIS Y+ GL++KK FG NEYRHW+ +E++ +  YEL   G  L P++          G  +  +         +HPH +S E   M + K+HL+MR++E RI  + ++Q FNK+LSLA++A++++  S  W+ ML+ST+GFLK+IS VSGKDI   + QW+  +GV KF  SF+FNRKRN++ELE+ Q Y+  G QKYVGPL V VQELDGSF+HT+Q+E+   +H+IPCHSKSRRNKKKKIPL+ GEEVDMDLSA  D DSP+LW+R+DPDM+  R+V  +Q D+MWQYQLRYERDV +Q E++ AL+K+P   +R AL DIL Q + F+RVR      LAK+  +          +  +F +MF  K+C +I + N+F +F +YF+QK +P A++  R  +  C   +  FI                    L+L+K+NDNR N FSD  Y + +I+AL N++ PA +   E  V++   LN + R +L E+ R LNMEK+L S+++++T SCL+AIR LQ  GH+P++ A F+ Y++YG F DIR+ ALE +VD+  V+ S ++L WLL++++ DPVP +RH I+  LTK+PPF   K+++S   N  LV++LW+LMNS  + ++RLRC  ++ Y TL+G   P C+P    G+V++LKEKKA+ N T
Sbjct:   21 ESPRPYKLTHQVVCINNINFQRKSVVGFVELTIFPTVANLNRIKLNSKQCRIYRVRIND------LEAAFIYNDPTLEVCHSESKQRNLNYFSNAYAAAVSAVDPDAGNGELCIKVPSELWKHVDELKVLKIHINFSLDQPKGGLHFVVPSVEGSMAERGAHVFSCGYQNSTRFWFPCVDSYSELCTWKLEFTVDAAMVAVSNGDLVETVYTHDMRKKTFHYMLTIPTAASNISLAIGPFEILVDPYMHEVTHFCLPQLLPLLKHTTSYLHEVFEFYEEILTCRYPYSCFKTVFIDEAYVEVAAYASMSIFSTNLLHSAMIIDETPLTRRCLAQSLAQQFFGCFISRMSWSDEWVLKGISGYIYGLWMKKTFGVNEYRHWIKEELDKIVAYELKTGGVLLHPIF---------GGGKEKDNPASHLHFSIKHPHTLSWEYYSMFQCKAHLVMRLIENRISMEFMLQVFNKLLSLASTASSQKFQSHMWSQMLVSTSGFLKSISNVSGKDIQPLIKQWVDQSGVVKFYGSFAFNRKRNVLELEIKQDYTSPGTQKYVGPLKVTVQELDGSFNHTLQIEENSLKHDIPCHSKSRRNKKKKIPLMNGEEVDMDLSA-MDADSPLLWIRIDPDMSVLRKVEFEQADFMWQYQLRYERDVVAQQESILALEKFPTPASRLALTDILEQEQCFYRVRMSACFCLAKIANSMVSTWTGPPAMKSLFTRMFCCKSCPNIVKTNNFMSFQSYFLQKTMPVAMALLRDVHNLCPKEVLTFI--------------------LDLIKYNDNRKNKFSDNYYRAEMIDALANSVTPAVSVNNE--VRTLDNLNPDVRLILEEITRFLNMEKLLPSYRHTITVSCLRAIRVLQKNGHVPSDPALFKSYAEYGHFVDIRIAALEAVVDYTKVDRSYEELQWLLNMIQNDPVPYVRHKILNMLTKNPPF--TKNMESPLCNEALVDQLWKLMNSGTSHDWRLRCGAVDLYFTLFGLSRPSCLPLPELGLVLNLKEKKAVLNPT 1008

The following BLAST results are available for this feature:

BLAST of TCONS_00067330-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00067330-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1

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Match Name	E-value	Identity	Description
TAF2	0.000e+0	47.28	Transcription initiation factor TFIID subunit 2 OS...	[more]

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TCONS_00067330-protein (polypeptide) - C. hemisphaerica

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