Sequence
The following sequences are available for this feature:
polypeptide sequence
>TCONS_00067317-protein ID=TCONS_00067317-protein|Name=TCONS_00067317-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1910bp Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following
gene feature:
This polypeptide derives from the following
transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Biological Process
Term Definition
GO:0035556 intracellular signal transduction
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category
Term Accession
Term Name
biological_process
GO:0035556 intracellular signal transduction
InterPro
Analysis Name:
InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
200 400 600 800 1000 1200 1400 1600 1800 Score = Score = Expect = 1.9E-6 / Score = 27.5 Expect = 0.06 / Score = 12.7 Score = Score = Score = Score = Score = Expect = 0.019 / Score = 8.5 Expect = 0.045 / Score = 4.6 Expect = 6.8E-16 / Score = 57.4 Expect = 2.8E-14 / Score = 52.3 Expect = 1.1E-20 / Score = 72.8 Expect = 1.1E-17 / Score = 63.3 Expect = 1.7E-16 / Score = 59.4 Expect = 1.3E-5 / Score = 25.2 Expect = 1.3E-7 / Score = 31.5 Expect = 9.3E-6 / Score = 25.6 Score = 8.658 Score = 8.929 Score = 11.687 Score = 9.775 Score = 9.521 Score = Score = Score = Score = Score = Score = Score = 10.392 Score = Sequence Coil Coil G3DSA:2.80.10.50 G3DSA:2.80.10.50 mobidb-lite mobidb-lite mobidb-lite mobidb-lite mobidb-lite SM00537 G3DSA:3.10.20.230 PF03607 PS50309 PS50309 PS50309 PS50309 PS50309 SSF89837 SSF89837 SSF89837 SSF89837 SSF89837 PS50231 SSF50370
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available COILS Coil Coil coord: 408..428 None No IPR available COILS Coil Coil coord: 1455..1475 None No IPR available GENE3D 2.80.10.50 coord: 1215..1349 None No IPR available GENE3D 2.80.10.50 coord: 674..824 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 1..32 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 58..112 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 1584..1603 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 1863..1902 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 788..881 IPR003533 Doublecortin domain SMART SM00537 doub1_11 coord: 1020..1093 IPR003533 Doublecortin domain GENE3D 3.10.20.230 coord: 1737..1830 IPR003533 Doublecortin domain PFAM PF03607 DCX coord: 1039..1085 IPR003533 Doublecortin domain PROSITE PS50309 DC coord: 284..343 IPR003533 Doublecortin domain PROSITE PS50309 DC coord: 176..225 IPR003533 Doublecortin domain PROSITE PS50309 DC coord: 1038..1086 IPR003533 Doublecortin domain PROSITE PS50309 DC coord: 1517..1562 IPR003533 Doublecortin domain PROSITE PS50309 DC coord: 1768..1825 IPR003533 Doublecortin domain SUPERFAMILY 89837 Doublecortin (DC) coord: 156..232 IPR003533 Doublecortin domain SUPERFAMILY 89837 Doublecortin (DC) coord: 983..1009 IPR003533 Doublecortin domain SUPERFAMILY 89837 Doublecortin (DC) coord: 1484..1552 IPR003533 Doublecortin domain SUPERFAMILY 89837 Doublecortin (DC) coord: 1740..1840 IPR003533 Doublecortin domain SUPERFAMILY 89837 Doublecortin (DC) coord: 283..338 IPR000772 Ricin B, lectin domain PROSITE PS50231 RICIN_B_LECTIN coord: 1233..1346 IPR000772 Ricin B, lectin domain SUPERFAMILY 50370 Ricin B-like lectins coord: 1224..1304
Blast
BLAST of TCONS_00067317-protein vs. Swiss-Prot (Human)
Match:
DCDC5 (Doublecortin domain-containing protein 5 OS=Homo sapiens GN=DCDC5 PE=2 SV=2)
HSP 1 Score: 270.011 bits (689), Expect = 4.735e-77
Identity = 204/671 (30.40%), Postives = 334/671 (49.78%), Query Frame = 0
Query: 983 PVKLQVLKNGESDINRAVPVIAPDIRNIKKDINVSGSSAPVNGYGGSVCMTPLDIEFQQFLERCTDALNLPFAARRVFTADGKEVLSLTSLEKNDLIYVSCGDNWNNPSLSQADQQKRLLLASLTSDILKIKKYIALRNCAGFILRMESDIFHRDSKLSLMKVPQDIYSNQIVAKESDTTYDLLNP--NDDATEEREMSAHQRTHARLDA-----RHADVEGVEEMADRESISHR--EALFGSNEGVP--------STLHEHQTTTCNYKWIYRGEFIQLESNPNMVIGLQETDASVNLEVVVCKKRFEDPNQRWTFADDG-TISLVSNPNLVLTVATPSMKDEAFVEEDITTILYDHARLIVTNRKAVVNGNANQIFWLDEETKLLHAFATDDVNIELTSAIQAAICSYSVFGESTIYQPGYFMKRRDGDRTYTLTFCEPCGRVIRGKQKLQRITDLRDFKCCMGQQAKKSKIKFKGAFQCLE-SKVDLSAHEAETTLTLWESQLHRLREESSVRVIASEITMTQNNPAVRLIIRRNGEGCSSNGMLLIGNMLSQILDDCTSKLNLPHAARRLYTMDGELITSMQQLLKPYYPELTYLRGHQSQTSSPLKVSKELKEGVDVNGQTHSNGSQEHPEQEDDGIEQIENLQIEKLDVRVPIDVWVSMGEPFAP 1634
PV+L+VL+NGE + NR+V ++ PDI +K +CT+ LNLP AARR++ GKE+ +L L++++L+YVSCG+ W NP LS A Q+K++ L +L SDI KI+ + + +L ++SDI SKL++ K P I+ + E + +P ++A+ E + +H R H R+ A R+A E + + +S+ + + LF + E S LH+H C+ ++ YR I + P +V+G+Q + +EVV+ +K+ + +QRW +D T LVSNP+LVL V+ ++E +IV K NG ANQ + + K L AF + ++ E+TSA A +C+ SV E I QPGY DG R L C CG+ +R ++ L+++ F C G + +K + +G F+ + ++VDLS +AE TL+ ++++L LR ++ + + + AV++I +NG+G NG L++ +L +CT +L L AA ++YT DG I +++ L+ E R + Q V KE + V+ N + D ++ I+ + L +R PI +WVS GEPF P
Sbjct: 14 PVRLRVLQNGEKNKNRSVTILGPDISPGRKT-------------------------------QCTEILNLPSAARRLYNEKGKEIFALKDLQRDELVYVSCGELWINPDLSIAQQKKQIFLRNLESDIAKIQIFCSTHKIEALVLEVQSDIV-SGSKLAVHK-PVAIFGEEKQVTEPEEKQMQEDPLTTENASSEI-LDSHVRAHLRMKACHTLPRYAWQETSHDFDEDDSLPKKTEKGLFENVEPQKKHSCSPKHSKLHKH----CHQQFEYRDGQIISHAAPQLVLGVQGPNLRSGMEVVLVEKKSDGSHQRWIHQEDSRTFHLVSNPDLVLAVSMTKTRNEVC-----------GYPVIVQKYKPYNNGAANQKWHYMKNIKALVAFHSTALDKEITSANYAGVCTSSVIKEENIDQPGYCYLSPDGKRKTML--CLACGQSMRTEKGLKQLLPGVPFLCISGTKTQKPFL--QGPFKVISVAEVDLSCDKAEKTLSYYQARLLSLRMKTCTQAASHSGMAATHQKAVKIIAYKNGDG-YRNGKLIVAGTFPMLLTECTEQLGLARAASKVYTKDGTPIFTLRDLVLWALDESFLQRDSEKQKQDAAPVGKE-QIIVEKNPRMKVKNRLFAKSVTSDSLDGIDK-SLLTLILRNPIAIWVSCGEPFLP 628
The following BLAST results are available for this feature:
