TCONS_00067223-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00067223-protein
Unique Name	TCONS_00067223-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	616

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00067223-protein ID=TCONS_00067223-protein|Name=TCONS_00067223-protein|organism=Clytia hemisphaerica|type=polypeptide|length=616bp
MLANDMSCVFGLMQSRQAHNKKEGEIHFEENHLRDVLKRVDELRQAGQLG
FCDVILRVSSQEFHAHKLILASCSDYFYAMFNGNMKESKERIVDINGVDV
EVMKLVLNFIYTGGIPLSNDNVEDILQAANLMLIKSLKDVCCRFLETLLT
VNNCLGMQKFAESYSCEGLFESTTNFICDNFGYITESDEFLQLQAVQLVP
IISSDELRVLNEEKVYEALIRWTKYSLSERKKYFPELVQHIRLPMLPPDY
LVDQVESESLFVEFPKCKELLVEAHHYLLLPNRRGVMAQTARTRPRKYEN
NNEILIACGGNGESSMNTTIFSYNMAKSSWNELPRLIPERGYHGLATIDG
EMYLVGGITTSRAEGREGQTELLDTVKKFDTEQNAWVNLAALHVKRSKMS
VIACSGLIFVVGGFDGSQTLNSVECYNPVNNRWKFVAPMLTHRRCTTSVS
NGNFVFIIGGHDGAQILNTIETYDVERDQWSVSDIAPMSDRRSFPCAVTI
NDDIYVMGGYDGHDTLRTCEIYNMTRNEWTSIEPMNTARSNAGAAHINRK
IFVVGGWDGVSLNSVEYYDLVTHEWVRVTSLPRPTTGIRCGILVNPSSSE
QKPKNKNGRGANCIIS

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_041996	XLOC_041996	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00067223	TCONS_00067223	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006652	Kelch_1
IPR011705	BACK
IPR000210	BTB/POZ_dom
IPR015915	Kelch-typ_b-propeller
IPR017096	BTB-kelch_protein
IPR011333	SKP1/BTB/POZ

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 26..46
None	No IPR available	GENE3D	3.30.710.10		coord: 35..189 e-value: 5.2E-42 score: 142.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 596..616
None	No IPR available	CDD	cd14735	BACK_Kelch	coord: 149..207 e-value: 1.69733E-18 score: 79.4451
None	No IPR available	SUPERFAMILY	117281	Kelch motif	coord: 303..590
IPR006652	Kelch repeat type 1	SMART	SM00612	kelc_smart	coord: 407..453 e-value: 1.3E-13 score: 61.2 coord: 304..350 e-value: 0.062 score: 22.2 coord: 454..502 e-value: 1.0E-9 score: 48.3 coord: 550..595 e-value: 3.0E-10 score: 50.1 coord: 503..549 e-value: 1.0E-12 score: 58.2 coord: 351..406 e-value: 0.0014 score: 27.9
IPR006652	Kelch repeat type 1	PFAM	PF01344	Kelch_1	coord: 491..536 e-value: 1.9E-13 score: 49.7 coord: 396..439 e-value: 3.0E-13 score: 49.0 coord: 538..582 e-value: 1.1E-15 score: 56.8 coord: 443..481 e-value: 3.3E-7 score: 29.7 coord: 340..390 e-value: 1.5E-5 score: 24.4
IPR011705	BTB/Kelch-associated	SMART	SM00875	BACK_2	coord: 154..256 e-value: 2.9E-36 score: 136.5
IPR011705	BTB/Kelch-associated	PFAM	PF07707	BACK	coord: 154..256 e-value: 2.3E-32 score: 111.1
IPR000210	BTB/POZ domain	SMART	SM00225	BTB_4	coord: 52..149 e-value: 2.3E-32 score: 123.5
IPR000210	BTB/POZ domain	PFAM	PF00651	BTB	coord: 42..147 e-value: 1.1E-30 score: 106.0
IPR000210	BTB/POZ domain	PROSITE	PS50097	BTB	coord: 52..119 score: 22.009
IPR015915	Kelch-type beta propeller	GENE3D	2.120.10.80		coord: 483..598 e-value: 4.0E-28 score: 97.7 coord: 273..482 e-value: 1.9E-40 score: 138.2
IPR017096	BTB-kelch protein	PIRSF	PIRSF037037	Kelch_gigaxonin	coord: 11..599 e-value: 9.6E-167 score: 553.5
IPR011333	SKP1/BTB/POZ domain	SUPERFAMILY	54695	POZ domain	coord: 30..146

Blast

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BLAST of TCONS_00067223-protein vs. Swiss-Prot (Human)
Match: KLHL2 (Kelch-like protein 2 OS=Homo sapiens GN=KLHL2 PE=1 SV=2)

HSP 1 Score: 377.867 bits (969), Expect = 9.953e-124
Identity = 199/571 (34.85%), Postives = 326/571 (57.09%), Query Frame = 0

Query:   13 MQSRQAHNKKEGEIHFEENHLRDVLKRVDELRQAGQLGFCDVILRVSSQEFHAHKLILASCSDYFYAMFNGNMKESKERIVDINGVDVEVMKLVLNFIYTGGIPLSNDNVEDILQAANLMLIKSLKDVCCRFLETLLTVNNCLGMQKFAESYSCEGLFESTTNFICDNFGYITESDEFLQLQAVQLVPIISSDELRVLNEEKVYEALIRWTKYSLSERKKYFPELVQHIRLPMLPPDYLVDQVESESLFVEFPKCKELLVEAHHYLLLPNRRGVMAQTARTRPRKYENNNEILIACGGNGESSMNTTIFSYNMAKSSWNELPRLIPERGYHGLATIDGEMYLVGGITTSRAEGREGQTELLDTVKKFDTEQNAWVNLAALHVKRSKMSVIACSGLIFVVGGFDGSQTLNSVECYNPVNNRWKFVAPMLTHRRCTTSVSNGNFVFIIGGHDGA--QILNTIETYDVERDQWSVSDIAPMSDRRSFPCAVTINDDIYVMGGYDGHDTLRTCEIYNMTRNEWTSIEPMNTARSNAGAAHINRKIFVVGGWDG-VSLNSVEYYDLVTHEWVRVTS 580
            + S+  + +K   +     H++   K ++ELR    L  CDV +     E  AH+++LA+CS YF+AMF G M ES+ + V I  VD   ++++++++YT  I ++ +NV+ +L AA L+ ++ +K  CC FLE+ L   NCLG++ FA+ ++C  L      +   +F  +  S+EFL L   Q+  +ISSD+L + +EEKV+EA+I W  +    R+++   L++H+RLP+LP +YLV +VE E+L      CK+ L+EA  Y LLP  + ++ ++ RTR R   N  ++++  GG    ++  ++  Y+  +  W+++  L   R   G+  + G ++ VGG   S           + TV  +D  ++ W ++A +  +RS +     +GL++ VGGFDGS  L+SVE YN  +N W  VAPM T R        G  ++ +GG+DGA  Q L+T+E Y+   ++W+   IA MS RRS      +N+ +Y +GG+DG    ++ E+Y+ T N W  +  MN  R NAG   +N  ++VVGG DG  +L SVEYY+  T +W  V+S
Sbjct:   19 LDSKDDNTEKHCPVTVNPWHMKKAFKVMNELRSQNLL--CDVTIVAEDMEISAHRVVLAACSPYFHAMFTGEMSESRAKRVRIKEVDGWTLRMLIDYVYTAEIQVTEENVQVLLPAAGLLQLQDVKKTCCEFLESQLHPVNCLGIRAFADMHACTDLLNKANTYAEQHFADVVLSEEFLNLGIEQVCSLISSDKLTISSEEKVFEAVIAWVNHDKDVRQEFMARLMEHVRLPLLPREYLVQRVEEEALVKNSSACKDYLIEAMKYHLLPTEQRILMKSVRTRLRTPMNLPKLMVVVGGQAPKAIR-SVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLR---------VRTVDSYDPVKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDGASRQCLSTVECYNATTNEWTY--IAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDKWTVVSS 575

HSP 2 Score: 129.798 bits (325), Expect = 1.142e-31
Identity = 74/193 (38.34%), Postives = 108/193 (55.96%), Query Frame = 0

Query:  407 LIFVVGGFDGSQTLNSVECYNPVNNRWKFVAPMLTHRRCTTS-VSNGNFVFIIGGHDGAQILNTIETYDVERDQWSVSDIAPMSDRRSFPCAVTINDDIYVMGGYDGHDTLRTCEIYNMTRNEWTSIEPMNTARSNAGAAHINRKIFVVGGWDGVS---LNSVEYYDLVTHEWVRVTSLPRPTTGIRCGILVN 595
            L+ VVGG    + + SVECY+    RW  VA  L  RRC    V     VF +GG +G+  + T+++YD  +DQW+   +A M DRRS   A  +N  +Y +GG+DG   L + E YN+  NEW  + PMNT RS+ G   +   ++ VGG+DG S   L++VE Y+  T+EW  +  +    +G   G+L N
Sbjct:  308 LMVVVGG-QAPKAIRSVECYDFKEERWHQVAE-LPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWT--SVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDGASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVLNN 496

The following BLAST results are available for this feature:

BLAST of TCONS_00067223-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00067223-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1

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Match Name	E-value	Identity	Description
KLHL2	9.953e-124	34.85	Kelch-like protein 2 OS=Homo sapiens GN=KLHL2 PE=1...	[more]

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TCONS_00067223-protein (polypeptide) - C. hemisphaerica

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