TCONS_00067185-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00067185-protein
Unique Name	TCONS_00067185-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	414

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00067185-protein ID=TCONS_00067185-protein|Name=TCONS_00067185-protein|organism=Clytia hemisphaerica|type=polypeptide|length=414bp
MYFHTILLVFSLIRPNTGEQDILYPYPSVRHHLDPRRSHRYVRDCQPKEH
GNLTHETIKTLNSSKEIQVNYFRKDFTGFGLQFGHHSIIKDPTSMISIHQ
PLDGGCQNLSTSTVKDTAIQNGCYIATNAGFFVPSDRSPYGACLGNIISD
SKIVRKTGIQNANFGIRRDGSIVIGYLSEDEVTETKNPFIQLVTGVGWII
RNGKSYVTESIKAECEDTQTTSSMARFFSVQSARTLLGVDGNGYVHLVTV
DGKTNSRGINLPAAVKYLIEQGVQNAINLDGGGSATYVINSTVVNYPSDT
HHDQPEILVPRKVSSIICVKKEMNGDVTPEHMASLSYCCNRNYFLIIGLT
VIIGFSCLLHVHFYTLYQHYRNKAKDLLSGQQKKEALQSLLQQANNELSS
EFDSDFDDFEDDDL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_041974	XLOC_041974	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00067185	TCONS_00067185	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR018711	NAGPA

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01

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POSITION

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 377..397
IPR018711	Phosphodiester glycosidase	PFAM	PF09992	NAGPA	coord: 121..319 e-value: 1.9E-33 score: 116.0

Blast

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BLAST of TCONS_00067185-protein vs. Swiss-Prot (Human)
Match: NAGPA (N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase OS=Homo sapiens GN=NAGPA PE=1 SV=2)

HSP 1 Score: 235.728 bits (600), Expect = 1.981e-72
Identity = 132/308 (42.86%), Postives = 183/308 (59.42%), Query Frame = 0

Query:   19 EQDILYPYPSVRHHLDPRRSHRYVRDCQPKEHGNLTHETIKTLNSSKE---IQVNYFRKDFTGFGLQFGHHSIIKDPTSMISIHQPLD-GGCQNLSTSTVKDTAIQNGCYIATNAGFFVPSDRSPYGACLGNIISDSKIVRKTG-IQNANFGIRRDGSIVIGYLSEDEVTETKNPFIQLVTGVGWIIRNGKSYVTESIKAECEDTQTTSSMARFFSVQSARTLLGVDGNGYVHLVTVDGKTNSRGINLPAAVKYLIEQGVQNAINLDGGGSATYVINSTVVNYPSDTHHDQPEILVPRKVSSIICVKK 321
            + D+L PYP  R         R  RDC     GN  HE+     ++     + V  F   F    +  GH +   +P    S+ +P   GGC     +TV++TA    C +A N GFF    R   G CLGN++SD + V  +G +QNA FGIRRDG++V GYLSE+EV +T+NPF+QL++GV W+IRNG  Y+ ES   EC++TQ T S ++F +V SART +G D  G + L   DG+T  RGINL    ++L++Q V NAINLDGGGSAT+V+N T+ +YPSD   D      PR+VS+++CV +
Sbjct:   33 DDDLLLPYPRARA--------RLPRDCTRVRAGNREHESWPPPPATPGAGGLAVRTFVSHFRDRAVA-GHLTRAVEPLRTFSVLEPGGPGGCAARRRATVEETARAADCRVAQNGGFF----RMNSGECLGNVVSDERRVSSSGGLQNAQFGIRRDGTLVTGYLSEEEVLDTENPFVQLLSGVVWLIRNGSIYINESQATECDETQETGSFSKFVNVISARTAIGHDRKGQLVLFHADGQTEQRGINLWEMAEFLLKQDVVNAINLDGGGSATFVLNGTLASYPSDHCQDN-MWRCPRQVSTVVCVHE 326

The following BLAST results are available for this feature:

BLAST of TCONS_00067185-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00067185-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1

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Match Name	E-value	Identity	Description
NAGPA	1.981e-72	42.86	N-acetylglucosamine-1-phosphodiester alpha-N-acety...	[more]

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TCONS_00067185-protein (polypeptide) - C. hemisphaerica

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