TCONS_00066978-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00066978-protein
Unique NameTCONS_00066978-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length490

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00066978-protein ID=TCONS_00066978-protein|Name=TCONS_00066978-protein|organism=Clytia hemisphaerica|type=polypeptide|length=490bp
MTGTTTLEKSEEYKKWTKLLKKTTYFSYLLIFLGGLEINAVQISMLYYLE
ESFKMTPDEVRLNFSVAEAFNALGQLFSGLLIGRYMDRTRNLKLSCLSIL
CATIVGNLLYSLPVHISFIVIGRFLCGFNEAFQVALCGEYKRCYKEDDLI
RVLSWYELCFAIGMAMGPGAPVFFSWVYFKVGGWRVDKYNALHVFLVIVS
VLLFIILWFQLTDLSKDLDRMREKYSQNEQTENTCHDDDSEDLHKRQIES
DQCSNINKRQKSFATSQKSWKIDNGSTEPPERKLMKWKELLQIDIVSLCT
CYTILRYATNASASLIAMNAATLFHWPVSWISWLTITGSGSSFLYITMLI
RCGVFNGLKQNYFFYLSSLNVSLILIAVLPLPRIVNMDTYAPQMLYLAFQ
MLAKGWAYFIVHSSGKILLFNTVTPENSCLIDSIRSTFGSLARLFAYSTS
FLCFNYPEFFFLPAGTILFIGNCVVVYRYKVHMYKRKKIL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041849XLOC_041849Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00066978TCONS_00066978Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011701MFS
IPR020846MFS_dom
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
ZOOM
x 1
POSITION
0
50100150200250300350400450Expect = 3.9E-19 / Score = 68.2Expect = 2.2E-18 / Score = 66.2Expect = 9.66848E-10 / Score = 57.7089Score = Score = SequenceCoilG3DSA:1.20.1250.20PF07690cd06174SSF103473
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 211..231
NoneNo IPR availableGENE3D1.20.1250.20coord: 1..238
e-value: 3.9E-19
score: 68.2
IPR011701Major facilitator superfamilyPFAMPF07690MFS_1coord: 29..446
e-value: 2.2E-18
score: 66.2
IPR020846Major facilitator superfamily domainCDDcd06174MFScoord: 25..209
e-value: 9.66848E-10
score: 57.7089
IPR020846Major facilitator superfamily domainSUPERFAMILY103473MFS general substrate transportercoord: 18..227
coord: 278..479

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00066978-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
ZOOM
x 1
POSITION
0
50100150200250300350400450Sequence
Match NameE-valueIdentityDescription
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