TCONS_00066924-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00066924-protein
Unique NameTCONS_00066924-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1652

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00066924-protein ID=TCONS_00066924-protein|Name=TCONS_00066924-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1652bp
LVSILLCVSAFKPVFPEKKTTVVTDLFKPLTLRCHARAEPIPLYEWSRNN
TIPSGQTKIQNGVVVKSNHVTLTLRNISWSDRGSYFCNAWNSKGYEFKEY
EVIVNAIQKFITRPTDQKVIYGESVKFDCVSRGIPTPHVSWFTYDESIAV
ERNVLDINPRQFSVSKNGSLVITNVRYVDEKTYRCVSTSPRLVRNVTAKL
DVYVEQAFLLKPIDQTVLYGSPVIFNCVSEGRPTPTISWQISLRGSEKVT
IVSKDNVDTDEKYEILNNGSLRINAAFVKDEGIYTCLSTNPGLTRNASAS
LVVYVTQEFTKVPQPKRVLYASNVTFECVSVGVPAPYVTWRKRASNSTTH
SALIHSNLSKYTIFANRTLGINNVDYSDEGIYECVSESPRLIKTKAAELN
IYVTQQFTHKPQSQTVIEGDPIAIMTCISTGVPTPKTYWKFTSSSTGAER
VLDSTSGGDSRLTVEENNDLVIRGVQNSDEGKYTCFSESPRLLVNVSATL
TVHVPPIVSISAKNITVFSSQSAHVTCSAFGDPSPVIRWYQIKNGERSEL
SERATVEDGTLSLKKVIKEDRGEYACVATNAAGEVDVQLKVKVNVRCLMD
EIPNGDLHPKKYVFGEKGKVRVTCRKGFKREGHQNLTCTGTGFFNHPFPK
CEDIDECDTEAPTEDGSGVGMEMNMTSPSIDDEPDVCDYNARCVNTLGSY
QCICAEGYIMVRNKCEFSPPGSKSKNPPPNEEKKTSTTPPPFNFDAFDRM
IILYQKRILDEENFLIKLLNFTNGISALPHFTWRREALRRVVDRALNVTV
SQVLVDAVPNSDARNLIKLNGLISNSLMDTRYQKEWNEINEKSCGTICLM
KYLEEYSMKIASKMSKGFKENILFNFDALSMKISSVNETFKYTDFEMSMM
KTRDEGNTVLLPKENYELLKDSASVSIQYKTLSELMPTPEIKEIDEGQIL
SDVFSLSFTKLHSKKNTTLKSPAQIIFKVPKDQEAHKEGVCVYWDFEKGQ
HGSWSTEGCEVANTTDTEVICQCNHLTNFAVIVPTPPLKMIHLQISLAVA
VGVGLCIFLAFLACLSHVCCSPYADSDRKAILVNITLTIIFCLMIFTGAV
FLSTMELVPAKYGQYFCYTLIGCLQLFGCAFFAWIFAEAIHLYLSTRLVI
DKGDGRLALFYFIGWGIPIMIVAVTGVLVYFNKFDLQSRCVVNISLYLVG
IIIGGPVLLYILGTLIVYILIRVSLASDRELLNAKILFHAKGAIYCSFCL
MLLHLLVLGSATMFLKYNGEILYHYFFAALTAAEGLYLVFYHCYVDRRAH
RTSSRSNSKKRNSYSTKETVTYSPNGTSSNTELAEEVSANDQKFLIKRPS
KRTSTDSRPSPPQVRNLQQHSSEEALEWDSAYQGMYGGSIGFSNNTPHSS
HETKPLLSRRTDTLTEEDGQLTPSTFHGGTISKNSTLSRNNTLPKRWKDL
DEVDGSASYNHHKHPIRRSNSKASSILSVETHTSGANTQHGLPVYFPAPP
PHYEMSLERRKKNTFGHESEPYDDDSRRGSFGMESDRMSNISSELSNILY
ELQAFDTNVPQDTHERKQPQASGNTLPSSRRDGPMTDISHSPMSTFRPTK
NKDSNKSDIQYEENKPPSYTDHQRVRILRGKSRQETDPADGLHSPGSMYS
SL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041832XLOC_041832Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00066924TCONS_00066924Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000832GPCR_2_secretin-like
IPR003598Ig_sub2
IPR013106Ig_V-set
IPR003599Ig_sub
IPR000203GPS
IPR000742EGF-like_dom
IPR001881EGF-like_Ca-bd_dom
IPR000436Sushi_SCR_CCP_dom
IPR013783Ig-like_fold
IPR013098Ig_I-set
IPR013032EGF-like_CS
IPR000152EGF-type_Asp/Asn_hydroxyl_site
IPR007110Ig-like_dom
IPR017981GPCR_2-like
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0004930G-protein coupled receptor activity
GO:0005509calcium ion binding
GO:0004888transmembrane signaling receptor activity
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
GO:0007166cell surface receptor signaling pathway
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007166 cell surface receptor signaling pathway
biological_process GO:0007186 G-protein coupled receptor signaling pathway
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0004930 G-protein coupled receptor activity
molecular_function GO:0004888 transmembrane signaling receptor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
ZOOM
x 1
POSITION
0
2004006008001000120014001600Score = 18.136SequencePR00249PF00002SM00408SM00406SM00409SM00303PF01825PS50221SM00181PS50026SM00179PF07645SM00032PF00084PS50923cd00033SSF57535G3DSA:1.20.1070.10G3DSA:2.10.25.10G3DSA:2.10.70.10PF13927G3DSA:2.10.25.10mobidb-litemobidb-litemobidb-litemobidb-litemobidb-litecd00096cd00054SSF57196G3DSA:2.60.40.10G3DSA:2.60.40.10G3DSA:2.60.40.10G3DSA:2.60.40.10PF07679PS01186PS00010PS50835PS50835PS50835PS50835PS50835PS50835SSF48726SSF48726SSF48726SSF48726SSF48726SSF48726PS50261
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000832GPCR, family 2, secretin-likePRINTSPR00249GPCRSECRETINcoord: 1201..1226
score: 30.83
coord: 1119..1142
score: 23.09
coord: 1157..1182
score: 28.55
coord: 1274..1295
score: 18.72
IPR000832GPCR, family 2, secretin-likePFAMPF000027tm_2coord: 1048..1286
e-value: 1.5E-12
score: 47.2
IPR003598Immunoglobulin subtype 2SMARTSM00408igc2_5coord: 417..492
e-value: 5.7E-4
score: 29.2
coord: 518..583
e-value: 1.0E-11
score: 54.9
coord: 120..192
e-value: 0.0024
score: 27.1
coord: 319..391
e-value: 0.0016
score: 27.7
coord: 218..293
e-value: 1.8E-6
score: 37.5
coord: 25..94
e-value: 6.0E-4
score: 29.1
IPR013106Immunoglobulin V-set domainSMARTSM00406igv1_8coord: 522..578
e-value: 0.76
score: 5.8
coord: 222..288
e-value: 0.33
score: 9.4
coord: 323..386
e-value: 1.2
score: 4.0
coord: 422..487
e-value: 1.0
score: 4.5
coord: 124..187
e-value: 0.54
score: 7.3
IPR003599Immunoglobulin subtypeSMARTSM00409IG_3ccoord: 313..404
e-value: 3.3E-6
score: 36.6
coord: 19..105
e-value: 4.8E-6
score: 36.1
coord: 411..503
e-value: 1.1E-6
score: 38.2
coord: 212..304
e-value: 4.5E-8
score: 42.8
coord: 114..203
e-value: 1.0E-7
score: 41.6
coord: 512..594
e-value: 6.8E-8
score: 42.2
IPR000203GPS motifSMARTSM00303GPS_3coord: 987..1038
e-value: 2.2E-16
score: 70.4
IPR000203GPS motifPFAMPF01825GPScoord: 991..1032
e-value: 1.1E-15
score: 57.9
IPR000203GPS motifPROSITEPS50221GPScoord: 988..1038
score: 16.478
IPR000742EGF-like domainSMARTSM00181egf_5coord: 656..716
e-value: 0.0023
score: 27.2
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 679..716
score: 9.243
IPR001881EGF-like calcium-binding domainSMARTSM00179egfca_6coord: 653..716
e-value: 1.8E-10
score: 50.8
IPR001881EGF-like calcium-binding domainPFAMPF07645EGF_CAcoord: 683..715
e-value: 7.3E-7
score: 29.2
IPR000436Sushi/SCR/CCP domainSMARTSM00032CCP_2coord: 597..651
e-value: 6.1E-6
score: 35.7
IPR000436Sushi/SCR/CCP domainPFAMPF00084Sushicoord: 600..651
e-value: 3.7E-8
score: 33.8
IPR000436Sushi/SCR/CCP domainPROSITEPS50923SUSHIcoord: 595..653
score: 7.619
IPR000436Sushi/SCR/CCP domainCDDcd00033CCPcoord: 600..652
e-value: 1.40478E-6
score: 46.6872
IPR000436Sushi/SCR/CCP domainSUPERFAMILY57535Complement control module/SCR domaincoord: 595..653
NoneNo IPR availableGENE3D1.20.1070.10coord: 1038..1333
e-value: 6.1E-9
score: 34.7
NoneNo IPR availableGENE3D2.10.25.10coord: 704..847
e-value: 5.0E-7
score: 29.0
NoneNo IPR availableGENE3D2.10.70.10coord: 596..651
e-value: 1.4E-9
score: 37.7
NoneNo IPR availablePFAMPF13927Ig_3coord: 505..580
e-value: 1.1E-12
score: 48.3
coord: 407..486
e-value: 1.2E-9
score: 38.6
coord: 12..91
e-value: 1.1E-10
score: 41.9
NoneNo IPR availableGENE3D2.10.25.10coord: 652..703
e-value: 1.7E-10
score: 40.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1413..1441
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1514..1535
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1302..1372
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1560..1652
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 719..741
NoneNo IPR availableCDDcd00096Igcoord: 30..101
e-value: 8.91904E-10
score: 56.3435
NoneNo IPR availableCDDcd00054EGF_CAcoord: 653..716
e-value: 8.72402E-8
score: 49.9426
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 684..715
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 500..595
e-value: 6.2E-21
score: 74.2
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 305..400
e-value: 2.4E-14
score: 52.7
coord: 205..304
e-value: 6.2E-17
score: 61.0
coord: 401..499
e-value: 4.4E-16
score: 58.3
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 4..112
e-value: 1.7E-15
score: 56.5
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 113..204
e-value: 1.9E-15
score: 56.2
IPR013098Immunoglobulin I-setPFAMPF07679I-setcoord: 208..303
e-value: 2.5E-11
score: 43.4
coord: 308..401
e-value: 4.0E-10
score: 39.5
coord: 109..201
e-value: 2.5E-11
score: 43.4
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 702..715
IPR000152EGF-type aspartate/asparagine hydroxylation sitePROSITEPS00010ASX_HYDROXYLcoord: 693..704
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 389..501
score: 11.188
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 108..185
score: 9.464
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 190..300
score: 10.553
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 13..103
score: 10.698
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 307..384
score: 9.246
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 505..592
score: 12.259
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 208..305
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 109..203
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 298..401
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 406..508
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 499..593
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 12..105
IPR017981GPCR, family 2-likePROSITEPS50261G_PROTEIN_RECEP_F2_4coord: 1045..1296
score: 18.136

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00066924-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
ZOOM
x 1
POSITION
0
2004006008001000120014001600Expect = 8.67e-49 / Id = 26.68Expect = 1.13e-40 / Id = 26.68Expect = 1.46e-39 / Id = 26.68Expect = 6.41e-33 / Id = 26.68Expect = 6.08e-34 / Id = 26.68Expect = 1.51e-41 / Id = 26.68Expect = 1.92e-31 / Id = 26.68Expect = 6.01e-32 / Id = 26.68Expect = 1.79e-51 / Id = 26.68Expect = 3.20e-49 / Id = 26.68Expect = 5.76e-32 / Id = 26.68Expect = 9.38e-41 / Id = 26.68Expect = 3.42e-39 / Id = 26.68Expect = 1.41e-34 / Id = 26.68Expect = 2.44e-32 / Id = 26.68Expect = 9.88e-37 / Id = 26.68Expect = 8.76e-33 / Id = 26.68Expect = 1.94e-31 / Id = 26.68SequenceHMCN1
Match NameE-valueIdentityDescription
HMCN11.788e-5126.68Hemicentin-1 OS=Homo sapiens GN=HMCN1 PE=1 SV=2[more]
back to top