TCONS_00066903-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00066903-protein
Unique Name	TCONS_00066903-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	606

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00066903-protein ID=TCONS_00066903-protein|Name=TCONS_00066903-protein|organism=Clytia hemisphaerica|type=polypeptide|length=606bp
LDKKNKLNKVMGNQIHVCIMNNIIPINSQIANLARDILDADDFAKPSLLL
KLKEITSSQSQDQEITLIEIWRCRLPNAVIQALRLDFTKVSGMWLTACQL
INTAVECCFFNPRYLQEIKKEYIPALIQESLNICRSIVKEYQTSSDMFKI
NLCANLSWIITSINTLMKSFVFVSVLVVASKHFLQFLMSEDDRISLLSLS
LLKNIIETNSDVFYHAAESRMHNVADELAYKISSTKDKKVARMTVSILLN
LLRLYSSLLDLFVTKRYRGFKMYLNKWKGNGFDENIEYIMGMLEEKAEKM
KSSQRHHNAAIVIQSFYRGCKTRNKLKTATLAMSKFQQSYRKKIETKQTL
DEKKRLDKVKKDHDERQRRKGFVKSKTKQLQSIEGIPAKTVDTFLDNLQQ
ESARKIQASWSGWKTRKVMREIAPHLVKEKAAILLQRQIRRWLEKVRKVK
QDARLDMIPDGLNDERRIELSNVLVNIREKFPKVDVSDEELIQGHLKANQ
MLNNHVIGLRSMRRRDDHRRALIGQLTIQSETLSRMPNLSSANEMTLEQL
ASRSTPVMVAARKQHVEFINDLKRPWWDRLSDESAVEDPNRPTVLGSHVI
DYEKNF

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_041829	XLOC_041829	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00066903	TCONS_00066903	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000048	IQ_motif_EF-hand-BS
IPR016024	ARM-type_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0005488	binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005488	binding
molecular_function	GO:0005515	protein binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000048	IQ motif, EF-hand binding site	SMART	SM00015	iq_5	coord: 305..327 e-value: 0.008 score: 25.4 coord: 398..420 e-value: 9.6 score: 13.8 coord: 427..449 e-value: 61.0 score: 7.2
IPR000048	IQ motif, EF-hand binding site	PFAM	PF00612	IQ	coord: 307..327 e-value: 1.2E-4 score: 21.5 coord: 429..444 e-value: 0.038 score: 13.7
IPR000048	IQ motif, EF-hand binding site	PROSITE	PS50096	IQ	coord: 306..335 score: 8.096
IPR000048	IQ motif, EF-hand binding site	PROSITE	PS50096	IQ	coord: 399..428 score: 6.888
None	No IPR available	GENE3D	4.10.270.10		coord: 409..458 e-value: 2.2E-4 score: 20.5
None	No IPR available	GENE3D	1.20.5.190		coord: 237..327 e-value: 2.1E-6 score: 27.1 coord: 329..408 e-value: 0.0065 score: 15.9
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 95..370

Blast

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BLAST of TCONS_00066903-protein vs. Swiss-Prot (Human)
Match: IQCB1 (IQ calmodulin-binding motif-containing protein 1 OS=Homo sapiens GN=IQCB1 PE=1 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 1.141e-48
Identity = 151/577 (26.17%), Postives = 278/577 (48.18%), Query Frame = 0

Query:   27 NSQIANLARDILDADDFAKPSLLLKLKEI---TSSQSQDQEITLIEIWRCRLPNAVIQALRLDFTKVSGMWLTACQLINTAVECCF-FNPRY-LQEIKKEYIPALIQESLNICRSIVKEYQTSSDMFKINLCANLSWIIT-SINTLMKSFVFVSVLVVASKHFLQFLMSEDDRISLLSLSLLKNIIETNSDVFYHAAESRMHNVADELAYKISSTKDKKVARMTVSILLNLLRLYSSLLDLF-VTKRYRGFKMYLNKWK-GNGFDENIEYIMGMLEEKAEKMKSSQRHHNAAIVIQSFYRGCKTRNKLKTATLAMSKFQQSYRKKIETKQTLDEKKRLDKVKKDHDERQRRKGFVK-----SKTKQLQSIEGIPAKTVDTFLDNLQQESARKIQASWSGWKTRKVMREIAPHLVKEKAAILLQRQIRRWLEKVRKVKQDARLDMIPDGLNDERRIELSNVLVN-IREKF--PKVDVSDEELIQGHLKANQMLNNHVIGLRSMRRRDDHRRALIGQLTIQSETLSRMPNLSSANEMTLEQLASRSTPVMVAARKQHVEFINDLKRPWWDRLSDESAVE 587
            + +I ++A ++  + +   P +LLKLKEI   T   S + +    +I+   L    +  L  D++++ G W T  QL      CC    P    +E   E +P+  +  L + R +   +  ++   + +   +   I+T S+  L+   V +   V+ S HFL  L +++ +I    + +L+NI++ NS          ++++ DE+ +K+ ST    +      +LL +   +  +L L   +  Y+G +  L+K + G  F + +  ++G+L     +    Q+ H AA +IQ++++G +TR +LK    A+   Q+S+R K  +K  L+    +++ K++ D + + +   +     S+  QL  +E +    V+     ++++SA  IQ  W G++ RK   +    L++ KAA+ LQR   ++L K RK K+          L D RR+EL   + + +R     P  DV   EL   H +A + L ++ +G     R   HR ALI Q++   E L + P+L  A     E   SRS PV   A++ H+  +  ++ PWW +L +ES  E
Sbjct:    7 DPRILSIAAEVAKSPEQNVPVILLKLKEIINITPLGSSELKKIKQDIYCYDLIQYCLLVLSQDYSRIQGGWTTISQLTQILSHCCVGLEPGEDAEEFYNELLPSAAENFLVLGRQLQTCFINAAKAEEKDELLHFFQIVTDSLFWLLGGHVELIQNVLQSDHFLHLLQADNVQIGSAVMMMLQNILQINSGDLLRIGRKALYSILDEVIFKLFSTPSPVIRSTATKLLLLMAESHQEILILLRQSTCYKGLRRLLSKQETGTEFSQELRQLVGLLSPMVYQEVEEQKLHQAACLIQAYWKGFQTRKRLKKLPSAVIALQRSFRSK-RSKMLLE----INRQKEEEDLKLQLQLQRQRAMRLSRELQLSMLEIVHPGQVEKHYREMEEKSALIIQKHWRGYRERKNFHQQRQSLIEYKAAVTLQRAALKFLAKCRKKKKLFAPWRGLQELTDARRVELKKRVDDYVRRHLGSPMSDVVSREL---HAQAQERLQHYFMGRALEERAQQHREALIAQISTNVEQLMKAPSLKEAEGKEPELFLSRSRPVAAKAKQAHLTTLKHIQAPWWKKLGEESGDE 575

The following BLAST results are available for this feature:

BLAST of TCONS_00066903-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00066903-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1

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Match Name	E-value	Identity	Description
IQCB1	1.141e-48	26.17	IQ calmodulin-binding motif-containing protein 1 O...	[more]

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TCONS_00066903-protein (polypeptide) - C. hemisphaerica

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