TCONS_00066831-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00066831-protein
Unique NameTCONS_00066831-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length197

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00066831-protein ID=TCONS_00066831-protein|Name=TCONS_00066831-protein|organism=Clytia hemisphaerica|type=polypeptide|length=197bp
MVQLITKRQNEYTSEVPEKRSKSLSRMTKSKSTSDIKQRAQSLERRGKLL
RKKSSKELLKDVDRSSCECGGATNQNIQSSKDFSTKKTLKQTKHFNSGKL
FDAVLDGDYSKVRRCIIEDQLEVNEYSPEGTTVLHLASAAGDVDIVELLI
ECGAVIDCKDVNGRTALEYAVLYGNFDSATTLIENGADSKCIKNGFH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041794XLOC_041794Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00066831TCONS_00066831Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
ZOOM
x 1
POSITION
0
20406080100120140160180Score = 10.419Score = 13.197Expect = 4.0E-13 / Score = 49.7Expect = 4.5E-26 / Score = 90.7Score = 23.551Score = Score = Expect = 2.62483E-19 / Score = 78.9646SequenceSM00248PS50088PS50088PF12796G3DSA:1.25.40.20PS50297SSF48403mobidb-litecd00204
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 129..158
e-value: 2.1E-4
score: 30.7
coord: 162..191
e-value: 0.056
score: 22.6
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 162..194
score: 10.419
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 129..161
score: 13.197
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 101..188
e-value: 4.0E-13
score: 49.7
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 5..195
e-value: 4.5E-26
score: 90.7
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 100..194
score: 23.551
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 99..192
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..45
NoneNo IPR availableCDDcd00204ANKcoord: 100..188
e-value: 2.62483E-19
score: 78.9646

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00066831-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
ZOOM
x 1
POSITION
0
20406080100120140160180Sequence
Match NameE-valueIdentityDescription
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