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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00066826-protein ID=TCONS_00066826-protein|Name=TCONS_00066826-protein|organism=Clytia hemisphaerica|type=polypeptide|length=322bp
MDLRILVVISFLKTTILALMANTGQLELKGEKLRYIGRELVDSKNVSSEM
ECHLFCLAHKSHCKSMNVEEIAVGTPYLYQCQSFNIRKNPENLPIDFEES
ERSNYYTLIRESITERSCQDWKNKGFDKDDFYVVTYSDEKQTKVFCEMKR
EDGPWLLIQRRTSSRDFYKTWENFKGGFGKGKHQKDKPFWLGNHLIYELT
KSKSQGVDLLIEAVDSDGKIATGRYAHFSIKQETEYFRLSSDLIHVSGFS
GFETLAGFSFATKDRSSLSAQTCVNSAQTAWWFGNDCNVEIDLNQRNSFV
WNALTANNSNVDIVKTTMMIKV Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| IPR002181 | Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain | SMART | SM00186 | FBG_2 | coord: 113..322
e-value: 1.5E-13
score: 43.9 |
| IPR002181 | Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain | PFAM | PF00147 | Fibrinogen_C | coord: 115..288
e-value: 9.4E-29
score: 100.7 |
| IPR002181 | Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain | PROSITE | PS51406 | FIBRINOGEN_C_2 | coord: 109..322
score: 26.171 |
| IPR002181 | Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain | SUPERFAMILY | 56496 | Fibrinogen C-terminal domain-like | coord: 113..321 |
| IPR014716 | Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1 | GENE3D | 3.90.215.10 | | coord: 47..259
e-value: 3.9E-30
score: 104.7 |
| IPR014715 | Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2 | GENE3D | 4.10.530.10 | | coord: 260..311
e-value: 0.001
score: 18.6 |
Blast
BLAST of TCONS_00066826-protein vs. Swiss-Prot (Human)
Match: TENX (Tenascin-X OS=Homo sapiens GN=TNXB PE=1 SV=4) HSP 1 Score: 82.8037 bits (203), Expect = 2.342e-17 Identity = 45/149 (30.20%), Postives = 75/149 (50.34%), Query Frame = 0 Query: 139 EKQTKVFCEMKREDGPWLLIQRRTSSR-DFYKTWENFKGGFGKGKHQKDKPFWLGNHLIYELTKSKSQGVDLLIEAVDSDGKIATGRYAHFSIKQETEYFRLSSDLIHVSGFSGFETLAGFSFATKDRSSLSAQ-TCVNSAQTAWWFGN 285
E+ VFC+M+ + G WL+ QRR + DF++ WE++ GFG + FWLGN ++ LT++ + + + A D + +Y F + EY+RL + H + +G F+ +DR S +C S + AWW+ N
Sbjct: 4051 ERPLNVFCDMETDGGGWLVFQRRMDGQTDFWRDWEDYAHGFGNISGE----FWLGNEALHSLTQAGDYSMRVDLRAGD---EAVFAQYDSFHVDSAAEYYRLHLEGYHGTAGDSMSYHSGSVFSARDRDPNSLLISCAVSYRGAWWYRN 4192
The following BLAST results are available for this feature:
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