Sequence
The following sequences are available for this feature:
polypeptide sequence
>TCONS_00066797-protein ID=TCONS_00066797-protein|Name=TCONS_00066797-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1543bp Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following
gene feature:
This polypeptide derives from the following
transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
Term Definition
GO:0005509 calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category
Term Accession
Term Name
molecular_function
GO:0005509 calcium ion binding
InterPro
Analysis Name:
InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
200 400 600 800 1000 1200 1400 Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Expect = 7.2E-4 / Score = 18.7 Expect = 3.0E-4 / Score = 20.1 Expect = 1.2E-5 / Score = 24.5 Expect = 0.029 / Score = 14.1 Expect = 0.15 / Score = 11.3 Expect = 0.05 / Score = 12.9 Expect = 2.2E-6 / Score = 27.0 Expect = 3.1E-5 / Score = 23.4 Expect = 8.7E-10 / Score = 38.1 Score = Score = Score = Score = Expect = 5.1E-4 / Score = 29.3 Expect = 0.0019 / Score = 27.4 Expect = 96.0 / Score = 1.8 Expect = 1.3E-5 / Score = 24.7 Score = 11.11 Score = 7.177 Score = 12.31 Score = 6.117 Score = 8.683 Score = Score = Score = Score = Score = Score = Sequence Coil Coil Coil Coil Coil Coil Coil Coil Coil Coil Coil Coil Coil Coil Coil Coil Coil Coil G3DSA:1.20.5.50 G3DSA:1.10.238.10 G3DSA:1.10.1330.10 G3DSA:1.10.238.10 G3DSA:1.20.5.50 G3DSA:1.20.5.340 G3DSA:1.10.238.10 G3DSA:1.10.238.10 mobidb-lite mobidb-lite mobidb-lite mobidb-lite SM00054 PF13833 PS50222 PS50222 PS50222 PS50222 PS50222 PS00018 PS00018 SSF47473 SSF47473
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available COILS Coil Coil coord: 1173..1231 None No IPR available COILS Coil Coil coord: 989..1009 None No IPR available COILS Coil Coil coord: 1488..1529 None No IPR available COILS Coil Coil coord: 1375..1395 None No IPR available COILS Coil Coil coord: 1059..1083 None No IPR available COILS Coil Coil coord: 1129..1149 None No IPR available COILS Coil Coil coord: 648..682 None No IPR available COILS Coil Coil coord: 728..748 None No IPR available COILS Coil Coil coord: 860..917 None No IPR available COILS Coil Coil coord: 579..627 None No IPR available COILS Coil Coil coord: 1407..1480 None No IPR available COILS Coil Coil coord: 1022..1042 None No IPR available COILS Coil Coil coord: 485..558 None No IPR available COILS Coil Coil coord: 788..822 None No IPR available COILS Coil Coil coord: 1347..1367 None No IPR available COILS Coil Coil coord: 409..479 None No IPR available COILS Coil Coil coord: 838..858 None No IPR available COILS Coil Coil coord: 1288..1342 None No IPR available GENE3D 1.20.5.50 coord: 589..691 None No IPR available GENE3D 1.10.238.10 coord: 351..395 None No IPR available GENE3D 1.10.1330.10 coord: 28..86 None No IPR available GENE3D 1.10.238.10 coord: 5..27 None No IPR available GENE3D 1.20.5.50 coord: 485..588 None No IPR available GENE3D 1.20.5.340 coord: 1405..1537 None No IPR available GENE3D 1.10.238.10 coord: 215..350 None No IPR available GENE3D 1.10.238.10 coord: 116..214 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 105..148 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 1150..1174 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 856..886 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 1460..1482 IPR002048 EF-hand domain SMART SM00054 efh_1 coord: 335..363 IPR002048 EF-hand domain PFAM PF13833 EF-hand_8 coord: 194..229 IPR002048 EF-hand domain PROSITE PS50222 EF_HAND_2 coord: 7..42 IPR002048 EF-hand domain PROSITE PS50222 EF_HAND_2 coord: 59..77 IPR002048 EF-hand domain PROSITE PS50222 EF_HAND_2 coord: 199..234 IPR002048 EF-hand domain PROSITE PS50222 EF_HAND_2 coord: 162..197 IPR002048 EF-hand domain PROSITE PS50222 EF_HAND_2 coord: 331..366 IPR018247 EF-Hand 1, calcium-binding site PROSITE PS00018 EF_HAND_1 coord: 344..356 IPR018247 EF-Hand 1, calcium-binding site PROSITE PS00018 EF_HAND_1 coord: 212..224 IPR011992 EF-hand domain pair SUPERFAMILY 47473 EF-hand coord: 160..229 IPR011992 EF-hand domain pair SUPERFAMILY 47473 EF-hand coord: 338..401
Blast
BLAST of TCONS_00066797-protein vs. Swiss-Prot (Human)
Match:
NINL (Ninein-like protein OS=Homo sapiens GN=NINL PE=1 SV=2)
HSP 1 Score: 124.405 bits (311), Expect = 2.194e-28
Identity = 87/269 (32.34%), Postives = 135/269 (50.19%), Query Frame = 0
Query: 1 MGDEDDVYAEQLKEVFKSCDLDNKGYINRNELIDLSQKLQLGDQVGDLLKEILG-DEFTDGKVTFEDFREGFVNVLANAIDCLGDEETE----------------DQSEWSEAGNRLSTITATTDKDR------QKVSPAHHAKVSKTQSGEVKPSQQPPQQHVKAQ----------KTW-------SNTSLSQSFEAGGDESAIQMRQIWDDLAVGESGYINLLQLSIVCEHIGMEGMADDELEALFTELDKNGDGLVSLREFMDGLF 229
M +E++ Y QL+EV+ SCD G+++R EL L KL L Q+ LL+ +LG D F +V FE+F+EGFV VL++ +E + S+W +R A T+ R Q +H + + +S E S + + +AQ +TW S S SF D Q+R +W++L VG SG+++ +L++VC+ +G++G+ +ELE LF +LD++GDG VSL EF GLF
Sbjct: 1 MDEEENHYVSQLREVYSSCDTTGTGFLDRQELTQLCLKLHLEQQLPVLLQTLLGNDHFA--RVNFEEFKEGFVAVLSSNAGVRPSDEDSSSLESAASSAIPPKYVNGSKWYGRRSRPELCDAATEARRVPEQQTQASLKSHLWRSASLESVESPKSDEEAESTKEAQNELFEAQGQLQTWDSEDFGSPQKSCSPSF----DTPESQIRGVWEELGVGSSGHLSEQELAVVCQSVGLQGLEKEELEDLFNKLDQDGDGKVSLEEFQLGLF 263
The following BLAST results are available for this feature:
