TCONS_00066713-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00066713-protein
Unique Name	TCONS_00066713-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	368

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00066713-protein ID=TCONS_00066713-protein|Name=TCONS_00066713-protein|organism=Clytia hemisphaerica|type=polypeptide|length=368bp
ALGDNKDRYGRQRMFGSLGWGSAMFAVGFTIDALPMYTVCEVTISKDYTY
AFYFFLFFMSIALLVATRFNFRDVGDYDETLHGTPRDVIHIFLTPNYTAT
VFAAFYAGLGMGLTRVFLFWHLEDLGAPPSLFGISSAVDHLSETLTYFFI
DSLLQRVTHVQIIYAGLLINFVRFLLISMIVNPWLILPLDILQGFSHAGV
WAALTSYLSKAAPKGYKAAVQGILQGFYYGLGRAVGAIGGGVFSHYYGTN
LAFKLYGVGSIPVFLLMFLIVTVYNRKQSKSLLNQQICRENIAPENNKNQ
NNLVKNNDVEDGGNKLFFIPNDSNATSNDVPPISYESGDFYFDANDQNLD
FSKTMGEPPQQTSEKHFK

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_041719	XLOC_041719	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00066713	TCONS_00066713	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR024989	MFS_assoc_dom
IPR020846	MFS_dom

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1250.20		coord: 6..74 e-value: 0.0027 score: 16.5
None	No IPR available	GENE3D	1.20.1250.20		coord: 82..286 e-value: 1.2E-19 score: 69.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 349..368
IPR024989	Major facilitator superfamily associated domain	PFAM	PF12832	MFS_1_like	coord: 2..254 e-value: 2.3E-56 score: 191.2
IPR020846	Major facilitator superfamily domain	PROSITE	PS50850	MFS	coord: 96..368 score: 8.549
IPR020846	Major facilitator superfamily domain	CDD	cd06174	MFS	coord: 99..271 e-value: 7.03906E-13 score: 66.5685
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 10..276

Blast

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BLAST of TCONS_00066713-protein vs. Swiss-Prot (Human)
Match: MFSD6 (Major facilitator superfamily domain-containing protein 6 OS=Homo sapiens GN=MFSD6 PE=1 SV=2)

HSP 1 Score: 225.328 bits (573), Expect = 5.551e-67
Identity = 121/327 (37.00%), Postives = 180/327 (55.05%), Query Frame = 0

Query:    2 LGDNKDRYGRQRMFGSLGWGSAMFAVGFTIDALPMYTVCEVTIS---------KDYTYAFYFFLFFMSIALLVATRFNFR-------------------DVGDYDETLHGTPR-----------DVIHIFLTPNYTATVFAAFYAGLGMGLTRVFLFWHLEDLGAPPSLFGISSAVDHLSETLTYFFIDSLLQRVTHVQIIYAGLLINFVRFLLISMIVNPWLILPLDILQGFSHAGVWAALTSYLSKAAPKGYKAAVQGILQGFYYGLGRAVGAIGGGVFSHYYGTNLAFKLYGVGSIPVFLLMFLI--VTVYNRKQSKSLLNQQI 287
            LG ++DRYG QRM+GSLGWG AM +VG  ID    YT  EV I          ++Y   F  F   M++AL+VAT+F FR                   +  +  E+   TP            D+I +  +  Y + +F A++ G G G    FL+WHLEDL    +LFG+ S + H+SE   YFF   L++ + H++++Y GL  N  R++ IS + N W +LP+++LQG +HA +WAA  SYLS A P   + + QGILQG + GLGR  GA+ GGV  +Y+G    F+  G+  + + LL  LI  + V + ++ K++L ++I
Sbjct:  317 LGKHRDRYGLQRMWGSLGWGLAMLSVGIGID----YTHIEVLIDGKGCKPPEYRNYQIVFIVFGVLMTMALIVATQFRFRYNHFKNDDSKGKEVEIPQVERNNSTESSEETPTTTSHSQAFNFWDLIKLLCSVQYGSVLFVAWFMGFGYGFVFTFLYWHLEDLNGTTTLFGVCSVLSHVSELTAYFFSHKLIELIGHIRVLYIGLACNTARYIYISYLENAWTVLPMEVLQGVTHAAIWAACISYLSAAVPPELRTSAQGILQGLHLGLGRGCGAMIGGVLVNYFGAAATFRGIGMACLVILLLFALIQWLAVPDEEEDKTMLAERI 639

The following BLAST results are available for this feature:

BLAST of TCONS_00066713-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00066713-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1

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Match Name	E-value	Identity	Description
MFSD6	5.551e-67	37.00	Major facilitator superfamily domain-containing pr...	[more]

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TCONS_00066713-protein (polypeptide) - C. hemisphaerica

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