TCONS_00066649-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00066649-protein
Unique NameTCONS_00066649-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length820

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00066649-protein ID=TCONS_00066649-protein|Name=TCONS_00066649-protein|organism=Clytia hemisphaerica|type=polypeptide|length=820bp
MALLTAYVTILIIFHTVTMVMCNQQSKEPIMKFNGEQDLTYLPSRRQVYQ
NPYVNKLEFKFRTIHPSGVLLVMSGIKLSVGSVRQGNVLGVYLVHGYLRY
SLTSFNHRKSSTLMGNNLNDNQWHHVSIVRTKSLTRIRLDNQTKLHIAPQ
LFQSFSYDKQTSIGGSGDSSNRKLYQKKISDSKNIESTSIPNFNGCLQLL
YIDGRDPVAYYNQGSNRVSIQPPGERLQYCTINDEVESIVGLPKPSSSLK
INLGKLNVTFSNSFLIEFSLRTFTQQGTILKTINENEVTFEIYLNLNAGK
MTCSLGESLSLPSEILVADGSWHYIRIEINPKEFQLQVDKTIHKTTIAIH
SNDIQNLANIVEFVGMVGCINSIKIQNKRVDLSHDEIIQRKNIRDVCTLL
NQCFPNPCLNNGVCRHERTDTTCDCTRNEFYGKHCEKTLYKPSCAVYQKF
GLNESSYCLIDLDGSGPLMSFTNLCQMSQQKGQIATIVKHNKADFFEGAY
GDSKAFKMTYHVFKYEIDETSLNLLIKNSQTCRQKVLFQCRRFAMKFKSP
GDPPNLTWLSNSGIQRFYWGDVPPSTRGCECGLSKSCTDTSEICNCDALQ
EDWAQDGGYITNKEDLPIRRVTLRGIEAGHSNITIGPLECFGDTSVKVSE
QELTEFKIRELLPKACCSLNKKDKLLKAANESIQLKLRSEEPYVTTQPLT
PSTKPYSVYVISHAALPVSNIFESENQNDENTFSIYEVILIIIAGFSTMI
LVVKFILCNIFRRLHGQVTLNHEHNRYDEPAMFPSTQSTGEVGNSSSLNR
NYGGINCTKTCVKSPSNYWV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041685XLOC_041685Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00066649TCONS_00066649Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001791Laminin_G
IPR000742EGF-like_dom
IPR013320ConA-like_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
ZOOM
x 1
POSITION
0
100200300400500600700800Score = 27.454Score = 19.403Expect = 5.4E-23 / Score = 81.1Score = Score = SequenceSM00282PF02210PS50025PS50025G3DSA:2.60.120.200G3DSA:2.60.120.200G3DSA:2.10.25.10cd00110cd00110cd00054SSF57196PS50026SSF49899SSF49899
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001791Laminin G domainSMARTSM00282LamG_3coord: 53..205
e-value: 3.7E-18
score: 76.3
coord: 262..378
e-value: 0.0015
score: 27.8
IPR001791Laminin G domainPFAMPF02210Laminin_G_2coord: 61..205
e-value: 3.3E-18
score: 66.4
coord: 270..348
e-value: 3.4E-5
score: 24.3
IPR001791Laminin G domainPROSITEPS50025LAM_G_DOMAINcoord: 29..230
score: 27.454
IPR001791Laminin G domainPROSITEPS50025LAM_G_DOMAINcoord: 238..397
score: 19.403
NoneNo IPR availableGENE3D2.60.120.200coord: 20..233
e-value: 5.4E-23
score: 81.1
NoneNo IPR availableGENE3D2.60.120.200coord: 234..401
e-value: 7.2E-15
score: 54.9
NoneNo IPR availableGENE3D2.10.25.10coord: 402..439
e-value: 6.9E-7
score: 28.6
NoneNo IPR availableCDDcd00110LamGcoord: 57..203
e-value: 1.07813E-16
score: 77.4584
NoneNo IPR availableCDDcd00110LamGcoord: 259..375
e-value: 9.26834E-10
score: 56.2725
NoneNo IPR availableCDDcd00054EGF_CAcoord: 405..436
e-value: 0.00408575
score: 34.9198
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 401..437
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 399..436
score: 15.666
IPR013320Concanavalin A-like lectin/glucanase domainSUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 29..211
IPR013320Concanavalin A-like lectin/glucanase domainSUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 245..402

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00066649-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
ZOOM
x 1
POSITION
0
MALLTAYVTILIIFHTVTMVMCNQQSKEPIMKFNGEQDLTYLPSRRQVYQNPYVNKLEFKFRTIHPSGVLLVMSGIKLSVGSVRQGNVLGVYLVHGYLRYSLTSFNHRKSSTLMGNNLNDNQWHHVSIVRTKSLTRIRLDNQTKLHIAPQLFQSFSYDKQTSIGGSGDSSNRKLYQKKISDSKNIESTSIPNFNGCLQLLYIDGRDPVAYYNQGSNRVSIQPPGERLQYCTINDEVESIVGLPKPSSSLKINLGKLNVTFSNSFLIEFSLRTFTQQGTILKTINENEVTFEIYLNLNAGKMTCSLGESLSLPSEILVADGSWHYIRIEINPKEFQLQVDKTIHKTTIAIHSNDIQNLANIVEFVGMVGCINSIKIQNKRVDLSHDEIIQRKNIRDVCTLLNQCFPNPCLNNGVCRHERTDTTCDCTRNEFYGKHCEKTLYKPSCAVYQKFGLNESSYCLIDLDGSGPLMSFTNLCQMSQQKGQIATIVKHNKADFFEGAYGDSKAFKMTYHVFKYEIDETSLNLLIKNSQTCRQKVLFQCRRFAMKFKSPGDPPNLTWLSNSGIQRFYWGDVPPSTRGCECGLSKSCTDTSEICNCDALQEDWAQDGGYITNKEDLPIRRVTLRGIEAGHSNITIGPLECFGDTSVKVSEQELTEFKIRELLPKACCSLNKKDKLLKAANESIQLKLRSEEPYVTTQPLTPSTKPYSVYVISHAALPVSNIFESENQNDENTFSIYEVILIIIAGFSTMILVVKFILCNIFRRLHGQVTLNHEHNRYDEPAMFPSTQSTGEVGNSSSLNRNYGGINCTKTCVKSPSNYWV100200300400500600700800Expect = 2.32e-52 / Id = 26.19SequenceCNTP5
Match NameE-valueIdentityDescription
CNTP52.315e-5226.19Contactin-associated protein-like 5 OS=Homo sapien... [more]
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