TCONS_00066514-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00066514-protein
Unique Name	TCONS_00066514-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1052

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00066514-protein ID=TCONS_00066514-protein|Name=TCONS_00066514-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1052bp
MDIKGILVAKSYREDQWMAGTITDVDDDSLEVTWCHGKIEKFPKTTSQLY
VYDIGPAGVQHVGIVCDGCRTKGLVDYRWKCTVCHDFDLCSFCYHGNTHN
TEHVFQRIDIPGAKPVQVRKRGGEKQARLNGFFQGAKVKRGKDWEWGNQD
GGIGTMGTVLGSYDWTGAFETSAVRSGVTISWEKSKLKANYRIGFNGKVD
LICENPAFGGQFYSSHLANTKTLLEHKRSSSQGKQFNTGDAVVMCKKIET
LVSAQEGSGGFIKEMTKCIGVVGRVVQTIDKGVFVQFGISERPDDVLALL
LNVNVKKQKHWLLNRDILQKVAEFQPGDTAKVINDKDTFIVMQTNIGNYH
PSQDVLVGEEVKIIRNDGEKLQIEYGNNKVFMSCGAVSKCEDQADRLLGL
LLEGFLRSRLDEKEKEKEEEEKRKRVEEQNRAAAAAAAREEQKPVIKKPQ
AKKERSLRELVEKGDDSSVAKYLEERPYMINQFENGSTSLHVAVFNNDSE
IVDIFLKKHADLSVADDNGDTVLHIAASKNLIGIGRKLVRSQCAVNKKNK
SEMTALSVATHKGYVDFVRMLVFEKCDTDQPDYEGNIPLHVACKVGNKNL
VRILLENKKDLLVPNRLGLFAIHIALDVENKEIIEMILDKSPEALNSTQP
DGSTPLHFVVRRGKAPMVEYIVHLITKYRYNIDSRTKQGQTALHLACMEG
FLAIVKLLLQHGADINAEMNDGNTSVLMCVLKHRMLFNLPPQLQGNELIR
PDLRTVKSHFENTNANGIITACFLLENGANLNHFNHAGKSALDVCEDSEL
TKLLCEFGKKHRSLQEPSSSAKAPPIPARRSSEKKSTKPKIQKQESELDF
DPCPLCQKRTPVEGRFQPCKHALFCYQHAETFQKCPQCFSEVTHLSRLSV
ERLPNCKFCAEKQINITFKPCGHQIACFECSKPFRVCITCEQRIEAKVPI
VDGSPKPKPKPRPAPRKPRPNSTTGSTPSSTAQSSASAQGAAAGGASIPE
EDENQLCIICFERPRNNVFQCGHTCCKVCSYAIDECHICRQTIKQRIFIY
DN

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_041614	XLOC_041614	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00066514	TCONS_00066514	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002110	Ankyrin_rpt
IPR001841	Znf_RING
IPR000433	Znf_ZZ
IPR013083	Znf_RING/FYVE/PHD
IPR020683	Ankyrin_rpt-contain_dom
IPR010606	Mib_Herc2

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding
GO:0046872	metal ion binding
GO:0004842	ubiquitin-protein transferase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0016567	protein ubiquitination

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity
molecular_function	GO:0008270	zinc ion binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 403..443
None	No IPR available	PFAM	PF13920	zf-C3HC4_3	coord: 905..945 e-value: 1.8E-7 score: 30.8 coord: 1004..1045 e-value: 2.7E-8 score: 33.4
None	No IPR available	GENE3D	1.10.1170.10		coord: 971..1052 e-value: 6.1E-12 score: 45.5 coord: 899..952 e-value: 4.8E-7 score: 29.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 951..997
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 815..846
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 412..460
None	No IPR available	CDD	cd00204	ANK	coord: 484..605 e-value: 1.61225E-29 score: 114.403
None	No IPR available	CDD	cd00204	ANK	coord: 683..808 e-value: 2.37455E-13 score: 67.4086
None	No IPR available	CDD	cd00204	ANK	coord: 579..709 e-value: 4.37816E-30 score: 115.944
None	No IPR available	SUPERFAMILY	159034	Mib/herc2 domain-like	coord: 129..205
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 44..120
IPR002110	Ankyrin repeat	PRINTS	PR01415	ANKYRIN	coord: 704..718 score: 49.0 coord: 486..501 score: 37.11
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 617..647 e-value: 660.0 score: 6.4 coord: 651..684 e-value: 12.0 score: 14.9 coord: 518..547 e-value: 89.0 score: 11.9 coord: 551..580 e-value: 46.0 score: 12.9 coord: 688..717 e-value: 2.2E-8 score: 43.9 coord: 485..514 e-value: 0.003 score: 26.8 coord: 584..613 e-value: 4.5E-4 score: 29.5
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 485..517 score: 12.369
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 584..616 score: 11.354
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 651..687 score: 9.244
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 688..720 score: 14.746
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 906..940 e-value: 0.9 score: 11.6 coord: 853..888 e-value: 0.39 score: 14.8 coord: 1007..1039 e-value: 0.32 score: 15.6
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 1007..1040 score: 9.937
IPR001841	Zinc finger, RING-type	CDD	cd00162	RING	coord: 1007..1043 e-value: 0.00242316 score: 36.2696
IPR000433	Zinc finger, ZZ-type	SMART	SM00291	zz_5	coord: 60..105 e-value: 1.0E-7 score: 41.7
IPR000433	Zinc finger, ZZ-type	PFAM	PF00569	ZZ	coord: 63..100 e-value: 5.6E-8 score: 32.4
IPR000433	Zinc finger, ZZ-type	PROSITE	PS01357	ZF_ZZ_1	coord: 66..93
IPR000433	Zinc finger, ZZ-type	PROSITE	PS50135	ZF_ZZ_2	coord: 60..107 score: 12.658
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10		coord: 827..898 e-value: 0.0077 score: 15.2
IPR020683	Ankyrin repeat-containing domain	GENE3D	1.25.40.20		coord: 601..813 e-value: 2.5E-41 score: 140.9
IPR020683	Ankyrin repeat-containing domain	PFAM	PF12796	Ank_2	coord: 490..579 e-value: 1.9E-11 score: 44.3 coord: 623..717 e-value: 1.3E-13 score: 51.2
IPR020683	Ankyrin repeat-containing domain	GENE3D	1.25.40.20		coord: 391..600 e-value: 8.1E-37 score: 126.3
IPR020683	Ankyrin repeat-containing domain	PROSITE	PS50297	ANK_REP_REGION	coord: 485..726 score: 60.509
IPR020683	Ankyrin repeat-containing domain	SUPERFAMILY	48403	Ankyrin repeat	coord: 477..808
IPR010606	Mib-herc2	PFAM	PF06701	MIB_HERC2	coord: 135..203 e-value: 1.6E-17 score: 63.4
IPR010606	Mib-herc2	PROSITE	PS51416	MIB_HERC2	coord: 124..207 score: 20.416

Blast

[Close]

BLAST of TCONS_00066514-protein vs. Swiss-Prot (Human)
Match: MIB1 (E3 ubiquitin-protein ligase MIB1 OS=Homo sapiens GN=MIB1 PE=1 SV=1)

HSP 1 Score: 376.711 bits (966), Expect = 5.253e-114
Identity = 295/1050 (28.10%), Postives = 461/1050 (43.90%), Query Frame = 0

Query:   32 VTWCHGKIEKFPKTTS-QLYVYDIGPAGVQHVGIVCDGCRTKGLVDYRWKCTVCHDFDLCSFCYHGNTHNTEHVFQRIDIPGAKPVQVRKRGGEKQARLNGFFQGAKVKRGKDWEWGNQDGGIGTMGTVLGSYDWTGAFETSAVRSGVTISWEKSKLKANYRIGFNGKVDLICENPAFGGQFYSSHLANTKTLLEHKRSSSQGKQFNTGDAVVMCKKIETLVSAQEGSGGFIKEMTKCIGVVGRVVQTI-DKGVFVQFGISERPDDVLALLLNVNVKKQKHWLLNRDILQKVAEFQPGDTAKVINDKDTFIVMQTNIGNYHPSQDVLVGE--EVKIIRNDGEKLQIEYGNNKVFMSCGAVSKCEDQADRLLGLLLEGFLRSRLDEKEKEKEEEEKRKRVEEQNRAAAAAAAREEQKPVIKKPQAKKERSLRELVEKGDDSSVAKYLEERPYMINQFENGSTSLHVAVFNNDSEIVDIFLKKHADLSVADDNGDTVLHIAASKNLIGIGRKLVRSQCAVNKKNKSEMTALSVATHKGYVDFVRMLVFEKCDTDQPDYEGNIPLHVACKVGNKNLVRILLENKKDLLVPNRLGLFAIHIALDVENKEIIEMILDKSPEA--LNSTQPDGSTPLHFVVRRGKAPMVEYIVHLITKYRYNIDSRTKQGQTALHLACMEGFLAIVKLLLQHGADINAEMNDGNTSVLMCVLKHRMLFNLPPQLQGNELIRPDLRTVKSHFE---NTNANGIIT-----------ACFLLENGANLNHFNHAGKSALDVCEDSELTKLLCEFGKKHRSLQEPSSSAKAPPIPARRSSEKKSTKPKIQKQESELDFDPCPLCQ--KRTPVEGRFQPCKHALFCYQHAETFQKCPQCFSEVTHLSRLSVERLPNCKFCAEKQINITFKPCGHQIACFECSKPFRVCITCEQRIEAKVPIV---------DGSPKPKPKPRPAPRKPRPNSTTGSTPSSTAQSSASAQGAAAGGASIPEEDENQLCIICFERPRNNVFQCGHTCCKVCSYAIDECHICRQTIKQRIFIY 1050
            V W +G    +  + +  L + D  P G++H G +CD CR + ++  RWKC  C ++DLC+ CYHG+ H+  H F RI  PG++ V +  R   K+    G F GA+V RG DW+W +QDGG G  G V    DW+     S+  S   + W+    K  YR+GF G  DL C   A GG FY  H      +L  +  +        GD V +   +E + S Q G GG+   M + +   G V     D  + VQ+    R     A+L   N+ +        +     ++FQ GD  +V  D +   ++Q   G +  +    +G+   V+ I +D + L++E        +  AVSK         G  +      RL +  K+  E ++   + E+   AAA                            GD + V   L+     +N    G T++  A  N   +I+ + LK++ D+   D +GD  +H AA  +   +   L R    +N +NK   T L +A +KG++  V+ L+   C     D EG+ PLH A      +++ +LLE   D+ + N  G  A+H A    N   + ++L K P    ++  + DG T LH         + E +VH   +   N+D +    QTALHLA       IV+LL++ GA ++ +  DG+T  L   L+H  L  L  QLQ  +    D+  V + +E   NT   G+ T           ACFL  NGA+L+  N  G+S LD+C D  L K L +  K+  S Q  S S                  P +   +SE   + C +C   KR  +   F PC H   C   +   +KC  C  +V   SR  +E    C  C++K+  + F+PCGH  AC  C+   + C+ C   +E +VP +         D +        P  +K + N+   +      Q              + +  E  +C +C +R +N +F CGH  C++C   + EC ICR+ I++RI +Y
Sbjct:   50 VVWDNGTAANYRCSGAYDLRILDSAPTGIKHDGTMCDTCRQQPIIGIRWKCAECTNYDLCTVCYHGDKHHLRHRFYRITTPGSERVLLESRRKSKKITARGIFAGARVVRGVDWQWEDQDGGNGRRGKVTEIQDWS----ASSPHSAAYVLWDNGA-KNLYRVGFEGMSDLKCVQDAKGGSFYRDHCP----VLGEQNGNRNPGGLQIGDLVNIDLDLEIVQSLQHGHGGWTDGMFETLTTTGTVCGIDEDHDIVVQYPSGNRWTFNPAVLTKANIVRSGDAAQGAE--GGTSQFQVGDLVQVCYDLERIKLLQRGHGEWAEAMLPTLGKVGRVQQIYSDSD-LKVEVCGTSWTYNPAAVSKVASA-----GSAISNASGERLSQLLKKLFETQESGDLNEELVKAAA---------------------------NGDVAKVEDLLKRPDVDVNGQCAGHTAMQAASQNGHVDILKLLLKQNVDVEAEDKDGDRAVHHAAFGDEGAVIEVLHRGSADLNARNKRRQTPLHIAVNKGHLQVVKTLLDFGCHPSLQDSEGDTPLHDAISKKRDDILAVLLEAGADVTITNNNGFNALHHAALRGNPSAMRVLLSKLPRPWIVDEKKDDGYTALHLAALNNHVEVAELLVH---QGNANLDIQNVNQQTALHLAVERQHTQIVRLLVRAGAKLDIQDKDGDTP-LHEALRHHTLSQLR-QLQDMQ----DVGKVDAAWEPSKNTLIMGLGTQGAEKKSAASIACFLAANGADLSIRNKKGQSPLDLCPDPNLCKALAKCHKEKVSGQVGSRS------------------PSMISNDSET-LEECMVCSDMKRDTL---FGPCGHIATCSLCSPRVKKCLICKEQVQ--SRTKIEE---CVVCSDKKAAVLFQPCGHMCACENCANLMKKCVQCRAVVERRVPFIMCCGGKSSEDATDDISSGNIPVLQKDKDNTNVNADVQKLQQQ-------------LQDIKEQTMCPVCLDRLKNMIFLCGHGTCQLCGDRMSECPICRKAIERRILLY 1006

The following BLAST results are available for this feature:

BLAST of TCONS_00066514-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00066514-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1

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Match Name	E-value	Identity	Description
MIB1	5.253e-114	28.10	E3 ubiquitin-protein ligase MIB1 OS=Homo sapiens G...	[more]

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TCONS_00066514-protein (polypeptide) - C. hemisphaerica

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