TCONS_00066459-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00066459-protein
Unique Name	TCONS_00066459-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	377

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00066459-protein ID=TCONS_00066459-protein|Name=TCONS_00066459-protein|organism=Clytia hemisphaerica|type=polypeptide|length=377bp
MYTSGSTGKPKAARVTNEKILGPFISNEVLTNTPEDVVYCALPFYHGAGG
VGGMSPMIYNGCTTIIRKKFSASNFISDCVKHDVTWVVYIGELWKYLLSQ
PPRDTDRRHKIRIAVGNGLRKNMVGPVKKRFGVQRIVELYGATDGNAVMI
NLDNVPGAVGFYYFLFPFLNQNCLVKVDVETGEIIRDENGRAILCKPGEV
GLIVGLIRQDRGFEGYVNNAKDTEKKIIRNLFNDGDSAVNSGDLLVMDEY
RNVFFVDRIGDTFRWRGENVATTEVENIMSSVISTAEDVVVYPVPIPGEG
GNAGMAYIREKENQQFSIKGVAQSLLEELPKYAIPMFIRIGRNLDQTGTF
KYQKXQCSFALVEILIKLVPSNIKRAL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_041576	XLOC_041576	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00066459	TCONS_00066459	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000873	AMP-dep_Synth/Lig

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity

Vocabulary: **Biological Process**
Term	Definition
GO:0008152	metabolic process

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
molecular_function	GO:0003824	catalytic activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.980		coord: 1..155 e-value: 1.2E-28 score: 99.3
None	No IPR available	GENE3D	2.30.38.10		coord: 176..259 e-value: 1.5E-8 score: 33.9
None	No IPR available	GENE3D	3.30.300.30		coord: 260..364 e-value: 4.2E-10 score: 39.6
None	No IPR available	SUPERFAMILY	56801	Acetyl-CoA synthetase-like	coord: 1..357
IPR000873	AMP-dependent synthetase/ligase	PFAM	PF00501	AMP-binding	coord: 1..266 e-value: 1.2E-38 score: 132.7

Blast

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BLAST of TCONS_00066459-protein vs. Swiss-Prot (Human)
Match: S27A1 (Long-chain fatty acid transport protein 1 OS=Homo sapiens GN=SLC27A1 PE=2 SV=1)

HSP 1 Score: 297.745 bits (761), Expect = 2.075e-95
Identity = 164/361 (45.43%), Postives = 227/361 (62.88%), Query Frame = 0

Query:    1 MYTSGSTGKPKAARVTNEKI--LGPFISNEVLTNTPEDVVYCALPFYHGAGGVGGMSPMIYNGCTTIIRKKFSASNFISDCVKHDVTWVVYIGELWKYLLSQPPRDTDRRHKIRIAVGNGLRKNMVGPVKKRFGVQRIVELYGATDGNAVMINLDNVPGAVGFYYFLFPFLNQNCLVKVDVETGEIIRDENGRAILCKPGEVGLIVGLIRQD---RGFEGYVNNAKDTEKKIIRNLFNDGDSAVNSGDLLVMDEYRNVFFVDRIGDTFRWRGENVATTEVENIMSSVISTAEDVVVYPVPIPGEGGNAGMAYIREKENQQFSIKGVAQSLLEELPKYAIPMFIRIGRNLDQTGTFKYQKXQ 356
            +YTSG+TG PKAA V + +   +  F  +        DV+Y  LP YH AG + G+   +  G T ++RKKFSAS F  DC+K++ T V YIGE+ +YLL QP R+ +RRH++R+AVGNGLR  +     +RFGV++I E YGAT+ N  + N+D   G+ GF   + P +    LVKV+ +T E++RD  G  I C+ GE GL+VG I Q    R F+GYV+ +  T KKI  ++F+ GDSA  SGD+LVMDE   ++F DR GDTFRWRGENV+TTEVE ++S ++    DV VY V +PG  G AGMA + +  +       + Q L + L  YA P+F+R+   +D TGTFK QK +
Sbjct:  247 IYTSGTTGLPKAAIVVHSRYYRMAAF-GHHAYRMQAADVLYDCLPLYHSAGNIIGVGQCLIYGLTVVLRKKFSASRFWDDCIKYNCTVVQYIGEICRYLLKQPVREAERRHRVRLAVGNGLRPAIWEEFTERFGVRQIGEFYGATECNCSIANMDGKVGSCGFNSRILPHVYPIRLVKVNEDTMELLRDAQGLCIPCQAGEPGLLVGQINQQDPLRRFDGYVSESA-TSKKIAHSVFSKGDSAYLSGDVLVMDELGYMYFRDRSGDTFRWRGENVSTTEVEGVLSRLLGQT-DVAVYGVAVPGVEGKAGMAAVADPHS-LLDPNAIYQELQKVLAPYARPIFLRLLPQVDTTGTFKIQKTR 603

The following BLAST results are available for this feature:

BLAST of TCONS_00066459-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00066459-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1

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Match Name	E-value	Identity	Description
S27A1	2.075e-95	45.43	Long-chain fatty acid transport protein 1 OS=Homo ...	[more]

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TCONS_00066459-protein (polypeptide) - C. hemisphaerica

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