Sequence
The following sequences are available for this feature:
polypeptide sequence
>TCONS_00066453-protein ID=TCONS_00066453-protein|Name=TCONS_00066453-protein|organism=Clytia hemisphaerica|type=polypeptide|length=393bp Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following
gene feature:
This polypeptide derives from the following
transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Cellular Component
Term Definition
GO:0005634 nucleus
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category
Term Accession
Term Name
cellular_component
GO:0005634 nucleus
InterPro
Analysis Name:
InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
50 100 150 200 250 300 350 Score = Expect = 1.2E-119 / Score = 397.8 Expect = 8.06645E-21 / Score = 84.5976 Expect = 3.27808E-12 / Score = 61.1004 Expect = 5.2E-24 / Score = 95.8 Expect = 1.2E-15 / Score = 68.0 Expect = 3.6E-29 / Score = 101.1 Expect = 4.8E-31 / Score = 106.5 Score = Score = Expect = 3.3E-32 / Score = 123.0 Expect = 2.7E-32 / Score = 111.3 Expect = 3.4E-41 / Score = 139.9 Sequence Coil PIRSF001771 cd00043 cd00043 SM00385 G3DSA:1.10.472.10 G3DSA:1.10.472.10 SSF47954 SSF47954 SM01332 PF02984 PF00134
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available COILS Coil Coil coord: 92..112 None No IPR available PIRSF PIRSF001771 Cyclin_A_B_D_E coord: 3..386 None No IPR available CDD cd00043 CYCLIN coord: 159..248 None No IPR available CDD cd00043 CYCLIN coord: 258..348 IPR013763 Cyclin-like SMART SM00385 cyclin_7 coord: 262..345 IPR013763 Cyclin-like GENE3D 1.10.472.10 coord: 250..393 IPR013763 Cyclin-like GENE3D 1.10.472.10 coord: 144..249 IPR013763 Cyclin-like SUPERFAMILY 47954 Cyclin-like coord: 258..377 IPR013763 Cyclin-like SUPERFAMILY 47954 Cyclin-like coord: 120..255 IPR004367 Cyclin, C-terminal domain SMART SM01332 Cyclin_C_2 coord: 258..378 IPR004367 Cyclin, C-terminal domain PFAM PF02984 Cyclin_C coord: 258..375 IPR006671 Cyclin, N-terminal PFAM PF00134 Cyclin_N coord: 131..255
Blast
BLAST of TCONS_00066453-protein vs. Swiss-Prot (Human)
Match:
CCNB1 (G2/mitotic-specific cyclin-B1 OS=Homo sapiens GN=CCNB1 PE=1 SV=1)
HSP 1 Score: 307.76 bits (787), Expect = 1.424e-101
Identity = 151/282 (53.55%), Postives = 200/282 (70.92%), Query Frame = 0
Query: 111 VEDIDADDLTNPSLCAEYVKDIYKYMHVLEKK--LQPKDYMSRQTNINKKMRSILVDWLIQVQSRFRLLQETLYLTIYTIDRFLAKCDVSRSELQLVGVTAMLIASKYEEMYAPEIGDFVYITDNAYSKVKIRAMEQKMLKACEFDFSNPLALHFLRRNSKAGAVDATKHTMAKYLMELTLVDYDMATLLPSQIAAAASYLSTQLLDKEKAEWTPTLAHYSTYSEAAIFPIVCQMAKLVLTMNMEGSKYQAVKSKYAESKFMKISRYPVLVGPYMRELADQV 390
V D+DA+D +P+LC+EYVKDIY Y+ LE++ ++PK + R+ N MR+IL+DWL+QVQ +FRLLQET+Y+T+ IDRF+ V + LQLVGVTAM IASKYEEMY PEIGDF ++TDN Y+K +IR ME K+L+A F PL LHFLRR SK G VD +HT+AKYLMELT++DYDM PSQIAA A L+ ++LD EWTPTL HY +Y+E ++ P++ +AK V+ +N +K+ VK+KYA SK KIS P L +++LA V
Sbjct: 153 VNDVDAEDGADPNLCSEYVKDIYAYLRQLEEEQAVRPKYLLGREVTGN--MRAILIDWLVQVQMKFRLLQETMYMTVSIIDRFMQNNCVPKKMLQLVGVTAMFIASKYEEMYPPEIGDFAFVTDNTYTKHQIRQMEMKILRALNFGLGRPLPLHFLRRASKIGEVDVEQHTLAKYLMELTMLDYDMVHFPPSQIAAGAFCLALKILD--NGEWTPTLQHYLSYTEESLLPVMQHLAKNVVMVNQGLTKHMTVKNKYATSKHAKISTLPQLNSALVQDLAKAV 430
The following BLAST results are available for this feature:
BLAST of TCONS_00066453-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (
Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens) )
Total hits: 1
M A A L H R R A L D N L R S E N A T L K Q G Q V K A T K N T L N R P A L A N I S N I Q R R P A L G T K K K D E H K E I T K G L T R H K A S T H L T A T E K K D V F I F Q D D S E E E T K Q F E N D Q I A K L T E Q M A E I D V E D I D A D D L T N P S L C A E Y V K D I Y K Y M H V L E K K L Q P K D Y M S R Q T N I N K K M R S I L V D W L I Q V Q S R F R L L Q E T L Y L T I Y T I D R F L A K C D V S R S E L Q L V G V T A M L I A S K Y E E M Y A P E I G D F V Y I T D N A Y S K V K I R A M E Q K M L K A C E F D F S N P L A L H F L R R N S K A G A V D A T K H T M A K Y L M E L T L V D Y D M A T L L P S Q I A A A A S Y L S T Q L L D K E K A E W T P T L A H Y S T Y S E A A I F P I V C Q M A K L V L T M N M E G S K Y Q A V K S K Y A E S K F M K I S R Y P V L V G P Y M R E L A D Q V D N A 50 100 150 200 250 300 350 Expect = 1.42e-101 / Id = 53.55 Sequence CCNB1
Match Name E-value Identity Description
CCNB1 1.424e-101 53.55 G2/mitotic-specific cyclin-B1 OS=Homo sapiens GN=C... [more]
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