Sequence
The following sequences are available for this feature:
polypeptide sequence
>TCONS_00066444-protein ID=TCONS_00066444-protein|Name=TCONS_00066444-protein|organism=Clytia hemisphaerica|type=polypeptide|length=270bp Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following
gene feature:
This polypeptide derives from the following
transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Cellular Component
Term Definition
GO:0016020 membrane
Vocabulary: Biological Process
Term Definition
GO:0006886 intracellular protein transport GO:0016192 vesicle-mediated transport
Vocabulary: Molecular Function
Term Definition
GO:0005484 SNAP receptor activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category
Term Accession
Term Name
biological_process
GO:0006886 intracellular protein transport
biological_process
GO:0016192 vesicle-mediated transport
cellular_component
GO:0016020 membrane
molecular_function
GO:0005484 SNAP receptor activity
InterPro
Analysis Name:
InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
20 40 60 80 100 120 140 160 180 200 220 240 260 Score = Expect = 1.4E-29 / Score = 101.3 Expect = 1.6E-24 / Score = 85.7 Expect = 6.5E-22 / Score = 77.7 Score = Expect = 1.17141E-25 / Score = 95.7195 Expect = 4.9E-18 / Score = 75.9 Expect = 2.7E-19 / Score = 68.8 Score = 17.57 Expect = 3.9E-17 / Score = 72.9 Score = Score = Sequence Coil G3DSA:1.20.5.110 G3DSA:1.20.58.70 PF14523 mobidb-lite cd15847 SM00397 PF05739 PS50192 SM00503 PS00914 SSF47661
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available COILS Coil Coil coord: 36..56 None No IPR available GENE3D 1.20.5.110 coord: 181..249 None No IPR available GENE3D 1.20.58.70 coord: 34..142 None No IPR available PFAM PF14523 Syntaxin_2 coord: 40..140 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 1..25 None No IPR available CDD cd15847 SNARE_syntaxin7_like coord: 185..244 IPR000727 Target SNARE coiled-coil homology domain SMART SM00397 tSNARE_6 coord: 177..244 IPR000727 Target SNARE coiled-coil homology domain PFAM PF05739 SNARE coord: 218..269 IPR000727 Target SNARE coiled-coil homology domain PROSITE PS50192 T_SNARE coord: 182..244 IPR006011 Syntaxin, N-terminal domain SMART SM00503 SynN_4 coord: 24..138 IPR006012 Syntaxin/epimorphin, conserved site PROSITE PS00914 SYNTAXIN coord: 188..227 IPR010989 SNARE SUPERFAMILY 47661 t-snare proteins coord: 29..237
Blast
BLAST of TCONS_00066444-protein vs. Swiss-Prot (Human)
Match:
STX7 (Syntaxin-7 OS=Homo sapiens GN=STX7 PE=1 SV=4)
HSP 1 Score: 188.348 bits (477), Expect = 5.079e-59
Identity = 111/230 (48.26%), Postives = 159/230 (69.13%), Query Frame = 0
Query: 34 RIANNASSNIQQLTRKIALIQKLVNQIGTPQDVPENFERLQSEQKDSNLLVKETSSLLQKLGNFQTNDPGEMRQRKIQQDKLHENFSNALNNFQKVQRLAADKERESLQRARAQSVEFRGGNDSFGDDNSRMYD-------NQPQLQRQTEAELSLDEIR---EREAAIRQLESDIVDVNEIFKDLAIMVHEQGETIDSIEANVDTAVSHVEAGNVHLHKARDYQKKSRR 253
++A SSNIQ++T+ IQ+ +NQ+GTPQD PE ++LQ +Q+ +N L KET +++ G+ T P E RQRKIQ+D+L F+ +L NFQKVQR AA++E+E + R RA S + SF +D+S+ + QPQ+Q Q E E++ D++R ERE++IRQLE+DI+D+NEIFKDL +M+HEQG+ IDSIEANV+ A HV+ N L +A DYQ+KSR+
Sbjct: 13 QLAQRISSNIQKITQCSVEIQRTLNQLGTPQDSPELRQQLQQKQQYTNQLAKETDKYIKEFGSLPTT-PSEQRQRKIQKDRLVAEFTTSLTNFQKVQRQAAEREKEFVARVRASS----RVSGSFPEDSSKERNLVSWESQTQPQVQVQDE-EITEDDLRLIHERESSIRQLEADIMDINEIFKDLGMMIHEQGDVIDSIEANVENAEVHVQQANQQLSRAADYQRKSRK 236
The following BLAST results are available for this feature:
BLAST of TCONS_00066444-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (
Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens) )
Total hits: 1
M S R G D F G A G G G Y Q Q S Y G G G G Y G Q S E R N G D T E Y M R I A N N A S S N I Q Q L T R K I A L I Q K L V N Q I G T P Q D V P E N F E R L Q S E Q K D S N L L V K E T S S L L Q K L G N F Q T N D P G E M R Q R K I Q Q D K L H E N F S N A L N N F Q K V Q R L A A D K E R E S L Q R A R A Q S V E F R G G N D S F G D D N S R M Y D N Q P Q L Q R Q T E A E L S L D E I R E R E A A I R Q L E S D I V D V N E I F K D L A I M V H E Q G E T I D S I E A N V D T A V S H V E A G N V H L H K A R D Y Q K K S R R K M C I L I R I L L I V V V V L G 20 40 60 80 100 120 140 160 180 200 220 240 260 Expect = 5.08e-59 / Id = 48.26 Sequence STX7
Match Name E-value Identity Description
STX7 5.079e-59 48.26 Syntaxin-7 OS=Homo sapiens GN=STX7 PE=1 SV=4 [more]
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