TCONS_00066444-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00066444-protein
Unique NameTCONS_00066444-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length270

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00066444-protein ID=TCONS_00066444-protein|Name=TCONS_00066444-protein|organism=Clytia hemisphaerica|type=polypeptide|length=270bp
MSRGDFGAGGGYQQSYGGGGYGQSERNGDTEYMRIANNASSNIQQLTRKI
ALIQKLVNQIGTPQDVPENFERLQSEQKDSNLLVKETSSLLQKLGNFQTN
DPGEMRQRKIQQDKLHENFSNALNNFQKVQRLAADKERESLQRARAQSVE
FRGGNDSFGDDNSRMYDNQPQLQRQTEAELSLDEIREREAAIRQLESDIV
DVNEIFKDLAIMVHEQGETIDSIEANVDTAVSHVEAGNVHLHKARDYQKK
SRRKMCILIRILLIVVVVLG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041568XLOC_041568Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00066444TCONS_00066444Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000727T_SNARE_dom
IPR006011Syntaxin_N
IPR006012Syntaxin/epimorphin_CS
IPR010989SNARE
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006886intracellular protein transport
GO:0016192vesicle-mediated transport
Vocabulary: Molecular Function
TermDefinition
GO:0005484SNAP receptor activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006886 intracellular protein transport
biological_process GO:0016192 vesicle-mediated transport
cellular_component GO:0016020 membrane
molecular_function GO:0005484 SNAP receptor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 36..56
NoneNo IPR availableGENE3D1.20.5.110coord: 181..249
e-value: 1.4E-29
score: 101.3
NoneNo IPR availableGENE3D1.20.58.70coord: 34..142
e-value: 1.6E-24
score: 85.7
NoneNo IPR availablePFAMPF14523Syntaxin_2coord: 40..140
e-value: 6.5E-22
score: 77.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availableCDDcd15847SNARE_syntaxin7_likecoord: 185..244
e-value: 1.17141E-25
score: 95.7195
IPR000727Target SNARE coiled-coil homology domainSMARTSM00397tSNARE_6coord: 177..244
e-value: 4.9E-18
score: 75.9
IPR000727Target SNARE coiled-coil homology domainPFAMPF05739SNAREcoord: 218..269
e-value: 2.7E-19
score: 68.8
IPR000727Target SNARE coiled-coil homology domainPROSITEPS50192T_SNAREcoord: 182..244
score: 17.57
IPR006011Syntaxin, N-terminal domainSMARTSM00503SynN_4coord: 24..138
e-value: 3.9E-17
score: 72.9
IPR006012Syntaxin/epimorphin, conserved sitePROSITEPS00914SYNTAXINcoord: 188..227
IPR010989SNARESUPERFAMILY47661t-snare proteinscoord: 29..237

Blast
[Close]
BLAST of TCONS_00066444-protein vs. Swiss-Prot (Human)
Match: STX7 (Syntaxin-7 OS=Homo sapiens GN=STX7 PE=1 SV=4)

HSP 1 Score: 188.348 bits (477), Expect = 5.079e-59
Identity = 111/230 (48.26%), Postives = 159/230 (69.13%), Query Frame = 0 
Query:   34 RIANNASSNIQQLTRKIALIQKLVNQIGTPQDVPENFERLQSEQKDSNLLVKETSSLLQKLGNFQTNDPGEMRQRKIQQDKLHENFSNALNNFQKVQRLAADKERESLQRARAQSVEFRGGNDSFGDDNSRMYD-------NQPQLQRQTEAELSLDEIR---EREAAIRQLESDIVDVNEIFKDLAIMVHEQGETIDSIEANVDTAVSHVEAGNVHLHKARDYQKKSRR 253
            ++A   SSNIQ++T+    IQ+ +NQ+GTPQD PE  ++LQ +Q+ +N L KET   +++ G+  T  P E RQRKIQ+D+L   F+ +L NFQKVQR AA++E+E + R RA S      + SF +D+S+  +        QPQ+Q Q E E++ D++R   ERE++IRQLE+DI+D+NEIFKDL +M+HEQG+ IDSIEANV+ A  HV+  N  L +A DYQ+KSR+
Sbjct:   13 QLAQRISSNIQKITQCSVEIQRTLNQLGTPQDSPELRQQLQQKQQYTNQLAKETDKYIKEFGSLPTT-PSEQRQRKIQKDRLVAEFTTSLTNFQKVQRQAAEREKEFVARVRASS----RVSGSFPEDSSKERNLVSWESQTQPQVQVQDE-EITEDDLRLIHERESSIRQLEADIMDINEIFKDLGMMIHEQGDVIDSIEANVENAEVHVQQANQQLSRAADYQRKSRK 236
The following BLAST results are available for this feature:
BLAST of TCONS_00066444-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
STX75.079e-5948.26Syntaxin-7 OS=Homo sapiens GN=STX7 PE=1 SV=4[more]
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