TCONS_00066436-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00066436-protein
Unique Name	TCONS_00066436-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	584

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00066436-protein ID=TCONS_00066436-protein|Name=TCONS_00066436-protein|organism=Clytia hemisphaerica|type=polypeptide|length=584bp
FSEDKTKSIMEPKTDYCNPWKVFGYMSLLYFFYSIFGILLSFLLVGSLVY
FTDGLKDLAFAKRIIIRDCFWFWKFATVFIPKTIKNIKKTPNQMVSETVQ
RHPSKKALIDAETGRSLTFNDIQVFINKIANLFKSSGYKPGDKVALLIDN
ELEYVPLWLGLNKVGIQVGLINYNLHGKSLEHCLTVVDFKGIICSSSLEE
ILKDIGFLNKPEYEIFIFDDGKTSIDSSSQNLQSLMENASIEAPEEYLFG
LRETCILMYTSGSTGRPKAAKMTKDKIMRFFILFPLLSNLQSDDIAYNTL
PLYHGSGGLVFASQWCFIGCTTIIRKKFSASRFFTDCIKYDVSYVGYIGE
LWKYLLSQPVRDTDRQHKVQKALGNGLRSSMVPQVKERFGIDKIFEFYGA
TEGNCGLVNIDNVSGSVGFYFILFPFFNTSCLVKADVETGEIIRNENGRA
ILCKPGEVGTLIGVINNKANFDGYVNNEKETNKKLRRNLFKEGDSAFISG
DLLVMDEYRNVFFVDRIGDTFRWRGENVATTEVENIMSSVVSTAEDVVVY
PVPIPGEGGNAGMAYIREKGNQQFSIKGVSLKVC

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_041566	XLOC_041566	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00066436	TCONS_00066436	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000873	AMP-dep_Synth/Lig
IPR020845	AMP-binding_CS

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity

Vocabulary: **Biological Process**
Term	Definition
GO:0008152	metabolic process

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
molecular_function	GO:0003824	catalytic activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000873	AMP-dependent synthetase/ligase	PFAM	PF00501	AMP-binding	coord: 97..524 e-value: 4.9E-58 score: 196.6
None	No IPR available	GENE3D	3.40.50.980		coord: 88..262 e-value: 1.7E-28 score: 99.1
None	No IPR available	GENE3D	2.30.38.10		coord: 425..517 e-value: 3.3E-8 score: 32.9
None	No IPR available	GENE3D	3.40.50.980		coord: 263..414 e-value: 2.2E-27 score: 95.1
None	No IPR available	SUPERFAMILY	56801	Acetyl-CoA synthetase-like	coord: 69..574
IPR020845	AMP-binding, conserved site	PROSITE	PS00455	AMP_BINDING	coord: 257..268

Blast

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BLAST of TCONS_00066436-protein vs. Swiss-Prot (Human)
Match: S27A1 (Long-chain fatty acid transport protein 1 OS=Homo sapiens GN=SLC27A1 PE=2 SV=1)

HSP 1 Score: 381.333 bits (978), Expect = 8.183e-125
Identity = 204/486 (41.98%), Postives = 292/486 (60.08%), Query Frame = 0

Query:   89 KTPNQMVSETVQRHPSKKALIDAETGRSLTFNDIQVFINKIANLFKSSGYKPGDKVALLIDNELEYVPLWLGLNKVGIQVGLINYNLHGKSLEHCLTVVDFKGIICSSSLEEILKDI-GFLNKPEYEIFIFDDGKTSIDSSSQNLQSLMENASIEAPEEYLF--GLRETCILMYTSGSTGRPKAAKMTKDKIMRFFILFPLLSNLQSDDIAYNTLPLYHGSGGLVFASQWCFIGCTTIIRKKFSASRFFTDCIKYDVSYVGYIGELWKYLLSQPVRDTDRQHKVQKALGNGLRSSMVPQVKERFGIDKIFEFYGATEGNCGLVNIDNVSGSVGFYFILFPFFNTSCLVKADVETGEIIRNENGRAILCKPGEVGTLIGVINNK---ANFDGYVNNEKETNKKLRRNLFKEGDSAFISGDLLVMDEYRNVFFVDRIGDTFRWRGENVATTEVENIMSSVVSTAEDVVVYPVPIPGEGGNAGMAYIRE 568
             T  ++    VQR P + AL+DA TG   TF  +  + N +ANLF+  G+ PGD VA+ ++   E+V LWLGL K G++  L+N NL  + L  CL     K +I    +   + ++ G L K   +    D G   I   +  L  L++ AS  AP   +   G+ +    +YTSG+TG PKAA +   +  R          +Q+ D+ Y+ LPLYH +G ++   Q    G T ++RKKFSASRF+ DCIKY+ + V YIGE+ +YLL QPVR+ +R+H+V+ A+GNGLR ++  +  ERFG+ +I EFYGATE NC + N+D   GS GF   + P      LVK + +T E++R+  G  I C+ GE G L+G IN +     FDGYV +E  T+KK+  ++F +GDSA++SGD+LVMDE   ++F DR GDTFRWRGENV+TTEVE ++S ++    DV VY V +PG  G AGMA + +
Sbjct:   76 HTIPRIFQAVVQRQPERLALVDAGTGECWTFAQLDAYSNAVANLFRQLGFAPGDVVAIFLEGRPEFVGLWLGLAKAGMEAALLNVNLRREPLAFCLGTSGAKALIFGGEMVAAVAEVSGHLGKSLIKFCSGDLGPEGILPDTHLLDPLLKEAST-APLAQIPSKGMDDRLFYIYTSGTTGLPKAAIVVHSRYYRMAAFGHHAYRMQAADVLYDCLPLYHSAGNIIGVGQCLIYGLTVVLRKKFSASRFWDDCIKYNCTVVQYIGEICRYLLKQPVREAERRHRVRLAVGNGLRPAIWEEFTERFGVRQIGEFYGATECNCSIANMDGKVGSCGFNSRILPHVYPIRLVKVNEDTMELLRDAQGLCIPCQAGEPGLLVGQINQQDPLRRFDGYV-SESATSKKIAHSVFSKGDSAYLSGDVLVMDELGYMYFRDRSGDTFRWRGENVSTTEVEGVLSRLLGQT-DVAVYGVAVPGVEGKAGMAAVAD 558

The following BLAST results are available for this feature:

BLAST of TCONS_00066436-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00066436-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1

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Match Name	E-value	Identity	Description
S27A1	8.183e-125	41.98	Long-chain fatty acid transport protein 1 OS=Homo ...	[more]

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TCONS_00066436-protein (polypeptide) - C. hemisphaerica

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