TCONS_00066432-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00066432-protein
Unique NameTCONS_00066432-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length645

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00066432-protein ID=TCONS_00066432-protein|Name=TCONS_00066432-protein|organism=Clytia hemisphaerica|type=polypeptide|length=645bp
MKLFSLNKKSSIAPCMILKLKDLTIMLDTKLDLTPILDYLPVGVVERKQN
LKHWLPNAEIKRLLGTEANIYEIGGRVFLDSLPEAAIPEKGMVDFASIDV
ILVTSYNNILALPYITEYSGFNGKVLATEPTLQIGKLLMEELVTYNKNMQ
KRKKFSLWKQKDIQRLLPSPLCEYKDAISWETVYSSHDVSSCISKIQSVG
FSEKIDILGLMQVTPVSSGLSIGSTNWILETDFHKIVYISNSSLFATHSM
AMHQTSLKDADVCILNSLTQTHTLNPDAMLRDFCNNLATTLKSGGNVLVP
CIPSGVIYDLFEYVCNFMDGSGLSFIPVYFVSPVAHSSLAHANIYGEWLN
QNKQAKMYLPEPPFLHHELVKNGRIKHFSTVHDRLSNNFKSPCVVFTGHP
SLRFGDVIHFMELWGGNHKNTIIFIDSEFNHIDALIPFQPLAMKAVFCPI
DPRLNYHQANKLIKDITPKHLIIPEEYTTPPVMTPQRTDFVIFSDCPLQS
YKGLDVLNISLKKDYSKIALSPELSQKLNPKQIEPGVALAMVKGKIVTRN
NRHILKPYDGRKSPEKEKTDRLYGNVDVEQFVAALRDQGIRNAEFEETES
GHIVHFPDKDAMIQLEPGNTHIINHVDEKLRVKIKNALLSCLLIV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041564XLOC_041564Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00066432TCONS_00066432Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022712Beta_Casp
IPR001279Metallo-B-lactamas
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
ZOOM
x 1
POSITION
0
50100150200250300350400450500550600Expect = 9.6E-22 / Score = 76.8Score = Score = SequenceSM01027PF10996PF16661G3DSA:3.60.15.10SSF56281
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022712Beta-Casp domainSMARTSM01027Beta_Casp_2coord: 307..436
e-value: 6.2E-9
score: 45.7
IPR022712Beta-Casp domainPFAMPF10996Beta-Caspcoord: 322..426
e-value: 2.1E-6
score: 27.8
IPR001279Metallo-beta-lactamasePFAMPF16661Lactamase_B_6coord: 97..240
e-value: 6.1E-9
score: 35.5
IPR001279Metallo-beta-lactamaseGENE3D3.60.15.10coord: 10..318
e-value: 9.6E-22
score: 76.8
IPR001279Metallo-beta-lactamaseSUPERFAMILY56281Metallo-hydrolase/oxidoreductasecoord: 13..33
coord: 180..490
coord: 80..152

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00066432-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
ZOOM
x 1
POSITION
0
MKLFSLNKKSSIAPCMILKLKDLTIMLDTKLDLTPILDYLPVGVVERKQNLKHWLPNAEIKRLLGTEANIYEIGGRVFLDSLPEAAIPEKGMVDFASIDVILVTSYNNILALPYITEYSGFNGKVLATEPTLQIGKLLMEELVTYNKNMQKRKKFSLWKQKDIQRLLPSPLCEYKDAISWETVYSSHDVSSCISKIQSVGFSEKIDILGLMQVTPVSSGLSIGSTNWILETDFHKIVYISNSSLFATHSMAMHQTSLKDADVCILNSLTQTHTLNPDAMLRDFCNNLATTLKSGGNVLVPCIPSGVIYDLFEYVCNFMDGSGLSFIPVYFVSPVAHSSLAHANIYGEWLNQNKQAKMYLPEPPFLHHELVKNGRIKHFSTVHDRLSNNFKSPCVVFTGHPSLRFGDVIHFMELWGGNHKNTIIFIDSEFNHIDALIPFQPLAMKAVFCPIDPRLNYHQANKLIKDITPKHLIIPEEYTTPPVMTPQRTDFVIFSDCPLQSYKGLDVLNISLKKDYSKIALSPELSQKLNPKQIEPGVALAMVKGKIVTRNNRHILKPYDGRKSPEKEKTDRLYGNVDVEQFVAALRDQGIRNAEFEETESGHIVHFPDKDAMIQLEPGNTHIINHVDEKLRVKIKNALLSCLLIV50100150200250300350400450500550600Expect = 0.00e+0 / Id = 46.98SequenceINT9
Match NameE-valueIdentityDescription
INT90.000e+046.98Integrator complex subunit 9 OS=Homo sapiens GN=IN... [more]
back to top