TCONS_00066311-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00066311-protein
Unique NameTCONS_00066311-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length188

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00066311-protein ID=TCONS_00066311-protein|Name=TCONS_00066311-protein|organism=Clytia hemisphaerica|type=polypeptide|length=188bp
TAIRNKLHHVKLIIIDEISMISSQQLLNIHTRLCETFGVNDDTQFAGKSI
IVCGDLFQLPPIFQSPVFSTEGPIIGAFKLWHLFKLAELDEIMRQKDDSD
FIDLLNNVRVGELNSNDESMIKSRLITREHPDYPIESLHLFAENASFHFH
NIQRLDTLPLETINVEAMDVYPRDFTESQITKVKNLPL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041511XLOC_041511Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00066311TCONS_00066311Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010285DNA_helicase_pif1-like
IPR027417P-loop_NTPase
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO:0000723telomere maintenance
Vocabulary: Molecular Function
TermDefinition
GO:0003678DNA helicase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006281 DNA repair
biological_process GO:0000723 telomere maintenance
molecular_function GO:0003678 DNA helicase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
ZOOM
x 1
POSITION
0
TAIRNKLHHVKLIIIDEISMISSQQLLNIHTRLCETFGVNDDTQFAGKSIIVCGDLFQLPPIFQSPVFSTEGPIIGAFKLWHLFKLAELDEIMRQKDDSDFIDLLNNVRVGELNSNDESMIKSRLITREHPDYPIESLHLFAENASFHFHNIQRLDTLPLETINVEAMDVYPRDFTESQITKVKNLPL20406080100120140160180Expect = 6.8E-10 / Score = 38.0Expect = 1.9E-17 / Score = 63.4Score = SequenceG3DSA:3.40.50.300PF05970SSF52540
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 2..127
e-value: 6.8E-10
score: 38.0
IPR010285DNA helicase Pif1-likePFAMPF05970PIF1coord: 3..120
e-value: 1.9E-17
score: 63.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 44..161

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00066311-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
ZOOM
x 1
POSITION
0
TAIRNKLHHVKLIIIDEISMISSQQLLNIHTRLCETFGVNDDTQFAGKSIIVCGDLFQLPPIFQSPVFSTEGPIIGAFKLWHLFKLAELDEIMRQKDDSDFIDLLNNVRVGELNSNDESMIKSRLITREHPDYPIESLHLFAENASFHFHNIQRLDTLPLETINVEAMDVYPRDFTESQITKVKNLPL20406080100120140160180Sequence
Match NameE-valueIdentityDescription
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