TCONS_00066211-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00066211-protein
Unique Name	TCONS_00066211-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	618

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00066211-protein ID=TCONS_00066211-protein|Name=TCONS_00066211-protein|organism=Clytia hemisphaerica|type=polypeptide|length=618bp
MGTQENPVFTLDSEFSEDEEIICSPTTTGSKHQVAAAKQHDEEDCLNEKT
PFIKSASHNSDDNSINNVQLSCHLYVLVFISAIGGFLFGYDTGVISGAMI
PIKRQFHLSYESQEIIVAITLVGAIIGAVSSAYLNDRFGRRIVLLIAAFS
FTLGSITMGLAVNDVSLIIVGRFIVGLGIGYASMTVPIYIAEAVPPKIRG
TLVTTNQLMITFGIFMASLINSLLSYTGSNGWRFMLGVGAIPGFIMFVGM
FFLPESPRWLLINGQREKARDVFIKLRGDSNVDEELDHISQSIENAQDSF
MDTLKKVGQSTGVKRALLVGCGLQAFQQLSAINTVMYYSATIIEMAGVED
ESEILWMATIVSFGNFAVTIFAMFIVDRIKRRKLMIGSLFGTGVGLLIIA
STFIFFYKNSMKTNFKPTLGLSSNKTFASKCMNYDRCFTCIENSKCGFCY
TTGGLEPSKASCLPINKTRKFNDHRTDWCSNSVFNLQEDISNLKWSTLSC
PSSTAWLAVSGMIFFLAAFAVGVGPLPWAINAEMYPLWARNVGQSAATST
NWTFNLVISLTFLNLIEWFTKPGVFIFYAILTFCGCLFLFLLLPETKGIR
MEDVATLFDGKLLVPGKR

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_041434	XLOC_041434	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00066211	TCONS_00066211	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003663	Sugar/inositol_transpt
IPR005828	MFS_sugar_transport-like
IPR005829	Sugar_transporter_CS
IPR020846	MFS_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0022891	substrate-specific transmembrane transporter activity
GO:0022857	transmembrane transporter activity
GO:0005215	transporter activity

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0022891	substrate-specific transmembrane transporter activity
molecular_function	GO:0022857	transmembrane transporter activity
molecular_function	GO:0005215	transporter activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003663	Sugar/inositol transporter	PRINTS	PR00171	SUGRTRNSPORT	coord: 532..544 score: 30.71 coord: 327..337 score: 52.05 coord: 169..188 score: 43.83 coord: 85..95 score: 65.08 coord: 509..530 score: 31.63
IPR003663	Sugar/inositol transporter	TIGRFAM	TIGR00879	TIGR00879	coord: 37..409 e-value: 1.1E-92 score: 309.2
IPR005828	Major facilitator, sugar transporter-like	PFAM	PF00083	Sugar_tr	coord: 78..410 e-value: 3.5E-91 score: 306.2 coord: 503..608 e-value: 1.4E-21 score: 76.9
None	No IPR available	GENE3D	1.20.1250.20		coord: 56..293 e-value: 4.8E-37 score: 126.8 coord: 294..612 e-value: 3.1E-33 score: 114.3
IPR005829	Sugar transporter, conserved site	PROSITE	PS00217	SUGAR_TRANSPORT_2	coord: 174..199
IPR020846	Major facilitator superfamily domain	PROSITE	PS50850	MFS	coord: 77..597 score: 53.446
IPR020846	Major facilitator superfamily domain	CDD	cd06174	MFS	coord: 78..406 e-value: 6.95501E-36 score: 136.29
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 501..603
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 58..402

Blast

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BLAST of TCONS_00066211-protein vs. Swiss-Prot (Human)
Match: MYCT (Proton myo-inositol cotransporter OS=Homo sapiens GN=SLC2A13 PE=1 SV=3)

HSP 1 Score: 476.093 bits (1224), Expect = 3.227e-161
Identity = 243/546 (44.51%), Postives = 343/546 (62.82%), Query Frame = 0

Query:   74 LYVLVFISAIGGFLFGYDTGVISGAMIPIKRQFHLSYESQEIIVAITLVGAIIGAVSSAYLNDRFGRRIVLLIAAFSFTLGSITMGLAVNDVSLIIVGRFIVGLGIGYASMTVPIYIAEAVPPKIRGTLVTTNQLMITFGIFMASLINSLLSYTGSNGWRFMLGVGAIPGFIMFVGMFFLPESPRWLLINGQREKARDVFIKLRGDSNVDEELDHISQSIENAQ---DSFMDTLKKVGQSTGVKRALLVGCGLQAFQQLSAINTVMYYSATIIEMAGVEDESEILWMATIVSFGNFAVTIFAMFIVDRIKRRKLMIGSLFGTGVGLLIIASTFIFFYKNSMKTNFKPTLGLSSNKTFASKCMNYDRCFTCIENSKCGFCYTTGGLEPSKASCLPINKTRKFNDHRTDWCSNSVFNLQEDISNLKWSTLSCPSSTAWLAVSGMIFFLAAFAVGVGPLPWAINAEMYPLWARNVGQSAATSTNWTFNLVISLTFLNLIEWFTKPGVFIFYAILTFCGCLFLFLLLPETKGIRMEDVATLFDGKLLVPG 616
            +YV+   SA+GGFLFGYDTGV+SGAM+ +KRQ  L    QE++V+ T+  A + A++   LN  FGRR  +L+A+  FT GS  +  A N+   ++ GR +VGLGIG ASMTVP+YIAE  PP +RG LVT N L IT G F AS+++   SY   +GWR+MLG+ A+P  I F G  FLPESPRWL+  GQ +KAR +  ++RG+  +DEE D I  +IE  +    S    + ++      +RAL+VGCGLQ FQQLS INT+MYYSATI++M+GVED+   +W+A++ +F NF  T+  +++V+++ RRKL  GSL GT V L+I+A  F+   + S +  FKP      N T    C  Y  C  C+ +  CGFCY         +SC+P+NK    N+     C N      EDI    W+   CP+  +W A+ G+I +L  FA G+GP+PW +N+E+YPLWAR+ G + ++  NW FN+++SLTFL+  E+ T  G F  YA     G LF++  LPETKG ++E++ +LFD +L   G
Sbjct:   81 VYVVAVFSALGGFLFGYDTGVVSGAMLLLKRQLSLDALWQELLVSSTVGAAAVSALAGGALNGVFGRRAAILLASALFTAGSAVLA-AANNKETLLAGRLVVGLGIGIASMTVPVYIAEVSPPNLRGRLVTINTLFITGGQFFASVVDGAFSYLQKDGWRYMLGLAAVPAVIQFFGFLFLPESPRWLIQKGQTQKARRILSQMRGNQTIDEEYDSIKNNIEEEEKEVGSAGPVICRMLSYPPTRRALIVGCGLQMFQQLSGINTIMYYSATILQMSGVEDDRLAIWLASVTAFTNFIFTLVGVWLVEKVGRRKLTFGSLAGTTVALIILALGFVLSAQVSPRITFKPIAPSGQNAT----CTRYSYCNECMLDPDCGFCYKMNKSTVIDSSCVPVNKAST-NEAAWGRCENETKFKTEDIF---WAYNFCPTPYSWTALLGLILYLVFFAPGMGPMPWTVNSEIYPLWARSTGNACSSGINWIFNVLVSLTFLHTAEYLTYYGAFFLYAGFAAVGLLFIYGCLPETKGKKLEEIESLFDNRLCTCG 617

The following BLAST results are available for this feature:

BLAST of TCONS_00066211-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00066211-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1

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Match Name	E-value	Identity	Description
MYCT	3.227e-161	44.51	Proton myo-inositol cotransporter OS=Homo sapiens ...	[more]

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TCONS_00066211-protein (polypeptide) - C. hemisphaerica

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