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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00066122-protein ID=TCONS_00066122-protein|Name=TCONS_00066122-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1301bp
MAGFESSTQVNHEETSSFISLLLDQEESTLEFGENTTLAMIKEKLDTETY
TEVEFNNCPSLPLEELCEIIPKMNSNLRSLIIKNTSWLNDETLELFTAIC
HKMIKIELQGCLINITRSGIESIARNCSSLLSLSIISTDEFSTPDHDSIE
SDQDGQESVTSTQSWNLDNRIFPALINNMTSKLRHFSLSGFSGLTCEGVE
KFLLHFHRTLRSIDFSELSLVNDLVLKTLGDHFVNLFVIKLNHCKKITNK
GIEHLFPRRTSLEVLELNGCEAVTDGCFETLSKSAPKLTIIKLDWCFRIT
EVSLKHLSMNCKRLSYISMRSTGLKSLPCSLSRLNFLNFLDISDCVSISF
PDKNIIDKGLTSIIKTLRKYDIENRFRVCALGGSQSGKTSMLLSLQSDHN
VADGMTFGVPVHMWYPLQDSSVVDSLPEKAQEKFSSLSLELWDASGRKAL
EGIHSQFMCKQCIYLVCFNAAVYNNAEKVPKWINTIQGKHPGSNIVIVAS
HCDLAPQDRVTSQCERVLKKALEEETTQVREIKEELLFLDDLGLFSMIGS
KRRKLERLLDKRPRIHPQVVQISSITGDGMEELRNLILKLVMNSTNNNVS
HTKEIEQFYYEIMVRKKNHTLFMSWKEIQLCTDKYGITDKNIVYSMLDHL
CDLGCIMMLENPNAPRLTPQQNGVEHQHLHPPAHESALSCINPPLLAEAV
ALLHRNEKQVQDLVLKVQREGHLDALWPTSKPNDWTLRNTFLHITENGMI
RESIIPLLVNKLKIPMDQMEMLVTELRRMLFLIEGAPNANYDVELILPNM
KNFSVFKRFFMPLQGLLPVIPQVNAWLPKCPPTHIQIGWDYRFVSAVPPY
LFLSIISACTVARPGSETLSYWQGGVYVRNGKIDVSVCQWKDKLVLQVLA
RAQVTNGTRQAVNKAWSTLCKYLIVIEQVLNKYPGLYYEVLALSNSQCKP
VLEVVDEFEAGDITENEALMDIPLKASTKSGVRGYTILPNYMSWLQSIAD
QTKIHISHASTIAKELNPMLGYLKGSGGFEVTTDLDNPEASMDSRLIICL
MTASYFDENCISKLKNNIKDKKIILATFEQDISLDAHTNLNDLLLNKVKV
DISSGKGSGSAYQPDTEELKKLVELCNTAVFGHGSLGDVKRNSLATAPLA
NTFSSFGNASHDSPSLLKKPFEQFSDIVKQYSDMSSETQIKMVASTAVAA
AVAKATAEHIAKQSNPTMGAKAAARAAEVADAVAKGDSERASKAVIATAK
AVDETVAFSANRQSTSLHPTNKRNSLSSIAENGNGGRNKSNTNKSTMCVI
I Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007264 | small GTPase mediated signal transduction |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005525 | GTP binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007264 |
small GTPase mediated signal transduction |
| molecular_function |
GO:0005525 |
GTP binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 1061..1081 |
| None | No IPR available | COILS | Coil | Coil | coord: 515..542 |
| None | No IPR available | GENE3D | 3.40.50.300 | | coord: 374..605
e-value: 3.9E-17
score: 61.6 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1262..1301 |
| None | No IPR available | SUPERFAMILY | 52047 | RNI-like | coord: 73..143
coord: 171..346 |
| IPR006553 | Leucine-rich repeat, cysteine-containing subtype | SMART | SM00367 | LRR_CC_2 | coord: 259..284
e-value: 440.0
score: 1.7
coord: 285..310
e-value: 29.0
score: 10.9
coord: 233..258
e-value: 290.0
score: 3.1
coord: 100..126
e-value: 220.0
score: 4.0
coord: 180..205
e-value: 29.0
score: 10.9 |
| IPR032675 | Leucine-rich repeat domain, L domain-like | GENE3D | 3.80.10.10 | | coord: 4..151
e-value: 2.0E-5
score: 23.1 |
| IPR032675 | Leucine-rich repeat domain, L domain-like | GENE3D | 3.80.10.10 | | coord: 156..373
e-value: 3.7E-18
score: 64.9 |
| IPR013684 | Mitochondrial Rho-like | PFAM | PF08477 | Roc | coord: 377..503
e-value: 1.4E-13
score: 51.0 |
| IPR020859 | Roc domain | PROSITE | PS51424 | ROC | coord: 369..594
score: 21.782 |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | SUPERFAMILY | 52540 | P-loop containing nucleoside triphosphate hydrolases | coord: 373..521
coord: 566..596 |
Blast
The following BLAST results are available for this feature:
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