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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00065983-protein ID=TCONS_00065983-protein|Name=TCONS_00065983-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1658bp
MFATGTKGLLVWCKQITSKYGSDVEVKNMTTSFKNGMAFCAIIHHFRPDL
IDFKKLSKENIAENNALAFRIAEDELDIPALLDVEDMVNMKVPDKLSIMT
YVSQYYNYFKDKVPGEIEIKKYGSKKRTLAKDKHEVIPNKKSNDKSKQGT
KMSSQKSNVCCLCEKKVFLMERLTVESKLFHRICFKCCVCNIQLKTSTYE
YDRSSGMFFCAKDFKNKATVRQEPIGSERSGAASPLSNISENSEVTEIPK
IADNPFKRNEQFVRKGIRPQSSPSDIEWEKTKVVKSKKTETKSEKPVKSG
KLSFPGLKKSKKKAELDPKDFHNPSYQQQLELSNFMHSLDAKTTDPNMNE
RVVVGSEGDQTFDEQRAGTLSGLQVTNAQPVQKFQGETELDSKTSAAISG
KSPKKKKLIFNVKKKLKGSKKNKDSSDGPQNEQKDLGCDGETCNQPPQNA
PNMNLYTEFKAEKTTEQKNTSANYENIEHFRDTKNETTNYESEEEVYEND
PRKNENSSVETMSENEIGVYQPRKVTRKLSEDHYKVPMKIISDPTTQKDE
NAQSDSDDLRAEEDISVAGPEYQSIRSKLKTVENKECIEKDINEKRTDTS
VGESYLLARSKLRSSNHSLKMSSPEPSISSNSIGGSKGSIDKVFGETEVE
NIGSSNVNQTDTSVILISDSDVTPKTDPVESESEISELMEVDGEGGDKGM
GSASNPFGSSDEDEEEAEERSIYSSAQDILSPGEDEEASPNNKEVATGTE
DGTSNTEEGDVNTVEVASNNGQIVTNNVKANNETMSGKIEKDCPSGLEDE
LIDEEDVAPTTEETTSKTVKAPPKMEEAILKTEGVTPKNGDVASHDEDIT
QETTTTLDNGEIENVVDITAAVRDCSSLDVAIQPNLLEGDKKGSFDVDME
PSEDVVHDSNPFGDSDENEDENEEENEESSDLEKTKKTEEEKIITGDDEP
MEIDDETGPTTQGENIDDTVTSHEPKRSPSPQPAREEDHWDGSENSIDKK
PSPQPRPKRETSSNPFDDTDDELDEFESSSTSSKQLPKELNPFLSSDDDD
DLDESFDASNPFAEDLRAERSGKSRQVDEYDVTNPFAEDAWEELQEERAP
KPFQRNQLERMSQKDRERLNKIGVDESNPFAEDLLEDEQITDYVPTKCPE
SSSGKKMVLKTKGGRKVRAAPAPPKNTSPAPRPQSSTPPTVRATPQPTPR
STKKRAAPKAPERPSSPPVALDPTSSLRRSLKKRPAPRPPQQLPPKDPDE
IPSKPPRRESSKTTVLPPGVQYCNVSFEAGNLKIKDSNDQEGASPVIDEK
TELIGDENTMNSDQVLTGSEKTSSVDLPETEANLHENEAKSDNESESFSE
DIDSNENESQKLPPVEQEDEEEEEKSEMSFSQDTENEDENEQSEGEKRES
VSELEDDLEEKEDSIAELPTSITIATSEQQTPVWKISEKRKAPTRPPQPA
RRLESLGDNEVEGSIALRDKQPRRKEIEIELRELEEKQRGLELEGVAMEK
KLRELGDDEPEDAYLLTWFDLVNQKNLLLRKENELIYMSQELDLLQSQRH
AEFELRQLMMKSEHEKTEADRDREEVLLSEILKMVTERSNIVEKMDEDRL
REHEEDEEVLQMMQAQGLKSTPSKDESPVPADSQQQTKTKKEKKKKKKEK
KEKKTKKK Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 915..942 |
| None | No IPR available | COILS | Coil | Coil | coord: 1467..1501 |
| None | No IPR available | COILS | Coil | Coil | coord: 1631..1658 |
| None | No IPR available | SMART | SM01203 | DUF3585_4 | coord: 1471..1611
e-value: 1.7E-42
score: 157.2 |
| None | No IPR available | GENE3D | 2.10.110.10 | | coord: 155..516
e-value: 2.8E-14
score: 52.7 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 666..794 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1594..1658 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 832..856 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 266..320 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 614..642 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 378..596 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 881..1467 |
| None | No IPR available | SUPERFAMILY | 57716 | Glucocorticoid receptor-like (DNA-binding domain) | coord: 152..185 |
| IPR001715 | Calponin homology domain | SMART | SM00033 | ch_5 | coord: 5..105
e-value: 1.2E-15
score: 68.0 |
| IPR001715 | Calponin homology domain | GENE3D | 1.10.418.10 | | coord: 4..113
e-value: 1.5E-25
score: 89.0 |
| IPR001715 | Calponin homology domain | PFAM | PF00307 | CH | coord: 7..110
e-value: 2.4E-23
score: 82.3 |
| IPR001715 | Calponin homology domain | PROSITE | PS50021 | CH | coord: 3..107
score: 14.995 |
| IPR001715 | Calponin homology domain | CDD | cd00014 | CH | coord: 7..109
e-value: 7.97161E-20
score: 86.5959 |
| IPR001715 | Calponin homology domain | SUPERFAMILY | 47576 | Calponin-homology domain, CH-domain | coord: 6..111 |
| IPR001781 | Zinc finger, LIM-type | SMART | SM00132 | lim_4 | coord: 159..213
e-value: 4.9E-5
score: 32.7 |
| IPR001781 | Zinc finger, LIM-type | PROSITE | PS00478 | LIM_DOMAIN_1 | coord: 160..194 |
| IPR001781 | Zinc finger, LIM-type | PROSITE | PS50023 | LIM_DOMAIN_2 | coord: 158..220
score: 11.088 |
| IPR022735 | Domain of unknown function DUF3585 | PFAM | PF12130 | DUF3585 | coord: 1478..1608
e-value: 7.0E-34
score: 116.8 |
Blast
BLAST of TCONS_00065983-protein vs. Swiss-Prot (Human)
Match: MILK2 (MICAL-like protein 2 OS=Homo sapiens GN=MICALL2 PE=1 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 1.448e-52 Identity = 99/252 (39.29%), Postives = 131/252 (51.98%), Query Frame = 0
Query: 4 TGTKGLLVWCKQITSKYGSDVEVKNMTTSFKNGMAFCAIIHHFRPDLIDFKKLSKENIAENNALAFRIAEDELDIPALLDVEDMVNMKVPDKLSIMTYVSQYYNYFKDKVP--GEIEIKKY---------GSKKRTLAKDKHEVIPNKKS------------------------NDKSKQGTKMSSQKSNVCCLCEKKVFLMERLTVESKLFHRICFKCCVCNIQLKTSTYEYDRSSGMFFCAKDFKNKATV 220
+ L WC+Q Y DV + NMTTSF++G+AFCAI+H RPDLI+F L KENI ENN LAFR+AE+ L IPALLD EDMV +KVPD+LSI+TYVSQYYNYF + P G +K+ G K A P +K D++ G+ +SS C +C K V L++R + +L+HR CF+C C+ L + Y+ G F C A+
Sbjct: 2 AAIRALQQWCRQQCEGY-RDVNICNMTTSFRDGLAFCAILHRHRPDLINFSALKKENIYENNKLAFRVAEEHLGIPALLDAEDMVALKVPDRLSILTYVSQYYNYFHGRSPIGGMAGVKRASEDSEEEPSGKKAPVQAAKLPSPAPARKPPLSPAQTNPVVQRRNEGAGGPPPKTDQALAGSLVSS----TCGVCGKHVHLVQRHLADGRLYHRSCFRCKQCSCTLHSGAYKATGEPGTFVCTSHLPAAASA 248 HSP 2 Score: 123.25 bits (308), Expect = 3.958e-28 Identity = 77/195 (39.49%), Postives = 117/195 (60.00%), Query Frame = 0
Query: 1434 WKISEKRKA----PTRPPQPARRLESLGDNEVEGSIALRDKQPRRKEIEIELRELEEKQRGLELEGVAMEKKLRELGDDEPEDAYLLTWFDLVNQKNLLLRKENELIYMSQELDLLQSQRHAEFELRQLMMKSEHEKTEADRDREEVLLSEILKMVTERSNIVEKMDEDRLREHEEDEEVLQMMQAQGLKSTPSK 1624
WK EK+ P RP PA + +L V + L +EI+ +L+++E + LEL GV +EK+LR D+ ED+ ++ WF L+++K LLLR+E+EL+Y S+ L + Q E ELR+LM K E K+ +R RE+ LL + + V +RS+IV+ +DEDRLRE EED+ + M++ GL+ SK
Sbjct: 694 WKEEEKKPHLQGKPGRPLSPAN-VPALPGETVTSPVRLHPDYLSPEEIQRQLQDIERRLDALELRGVELEKRLRAAEGDDAEDSLMVDWFWLIHEKQLLLRQESELMYKSKAQRLEEQQLDIEGELRRLMAKPEALKSLQERRREQELLEQYVSTVNDRSDIVDSLDEDRLREQEEDQMLRDMIEKLGLQRKKSK 887
The following BLAST results are available for this feature:
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