TCONS_00065865-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00065865-protein
Unique NameTCONS_00065865-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length311

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00065865-protein ID=TCONS_00065865-protein|Name=TCONS_00065865-protein|organism=Clytia hemisphaerica|type=polypeptide|length=311bp
PTDRRHTNSGRPRAFQERDERRILRVAEQLRSEYGHFTIKRVKLAAGIEH
VSDETVRKVFRKAGLRYTHSRKKGVLKRIDLKQRLQFAKRLKRTMTAKQL
ENLWRHEICFYFDAVGFTHKYNPFDQAQAPRTMAWRRPNDGLDFERTAKG
NHEGSGGRVAHFFCAISHAGGMVLAEQYRDRLNGDRFSAFLKEAFPQLGT
PESRNFLMDGCPVQNCKKAKQAISDINCEVFKITARSPDLNPIENTFHSV
KEQMREEAIVKRITFENFDDFSARCQRTLLNVSKDLIKRTIDSMPKRLDD
IIRRNGQRTKY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041263XLOC_041263Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00065865TCONS_00065865Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002492Transposase_Tc1-like
IPR012337RNaseH-like_dom
Vocabulary: Biological Process
TermDefinition
GO:0015074DNA integration
GO:0006313transposition, DNA-mediated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
biological_process GO:0006313 transposition, DNA-mediated
molecular_function GO:0003677 DNA binding
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13358DDE_3coord: 156..262
e-value: 1.5E-13
score: 50.7
IPR002492Transposase, Tc1-likePFAMPF01498HTH_Tnp_Tc3_2coord: 21..90
e-value: 2.3E-9
score: 37.3
IPR012337Ribonuclease H-like domainGENE3D3.30.420.10coord: 109..298
e-value: 1.7E-10
score: 40.4

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00065865-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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