TCONS_00065761-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00065761-protein
Unique NameTCONS_00065761-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length277

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00065761-protein ID=TCONS_00065761-protein|Name=TCONS_00065761-protein|organism=Clytia hemisphaerica|type=polypeptide|length=277bp
TTTTTPTTTTTTPSMTTTTPTTTTTTPTTTTTTQKTTTITTVESTTTPST
TATTLEPIPNPPLGLMKDNAASSCKQIKHDHPLSPNGHYWVVLHDNVSVW
CDMETDNGGWVKIGRVYIENNASSYNYYDILSNNIKKIGNAGSQNYLLDG
KLDNLTNWIGFSEIRMRCTGSSPDHLFHAKIISTKNENSLALFNYYVHAT
PRPTNLCDAFHYLADDTSELRMWSTEACENLEHGHTTRRNHRLYNNQCYD
TICVSVKFLQCDTEDMNIDGTWEFFIR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041198XLOC_041198Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00065761TCONS_00065761Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000885Fib_collagen_C
IPR014716Fibrinogen_a/b/g_C_1
IPR002181Fibrinogen_a/b/g_C_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005201extracellular matrix structural constituent
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005201 extracellular matrix structural constituent
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000885Fibrillar collagen, C-terminalPFAMPF01410COLFIcoord: 54..107
e-value: 1.7E-6
score: 27.4
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 66..198
e-value: 2.1E-9
score: 37.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..61
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 69..121

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00065761-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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