TCONS_00065757-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00065757-protein
Unique NameTCONS_00065757-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length796

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00065757-protein ID=TCONS_00065757-protein|Name=TCONS_00065757-protein|organism=Clytia hemisphaerica|type=polypeptide|length=796bp
MGAANSRDRRSSSGPLITLSCPECSERFGNELALVQHYNQTHPNIPHNES
ASNNSNPHKFNVGDRVLAMWESAKWQYFPATIAREIDDRLKYEIDWDDGD
TTGRVVDSSNIYQNTPVNPQDVQAGTKVLFKQGSYGAGGCQLTGGDRWHE
GIITEAHRLPGGIYRFSGHHTKGANDGKSLGYHGYNHNFKNYTIDSLRLS
TSNSNVTGNDLLTNRTSALQNNSSNTSSGGAFEVGDRVLAMWGLNKWQYF
PATIAREIEDGLKYEIDWDDGDTTGRIVNVCNIYRDIKPNSSNIEIGSKV
LFSQGSYRAGDTQTSGGKRWHEGVVTSINSVGGRLQLSGHHTKGVADGKS
TSYGGYVYNFTNYAVDSLRLSGSSTHATATNNHTHSQGTINNANINRTFN
TGDGVLAMWSLEMWQYFRATIVRKIPGKNQYEINWDDGDTTGRIVDSFNI
YLNANQPGEVITEGSKVLFQQGAYSAGSTQQSGGNRWHEGVITNVHTLPG
GVYRYTGHHTKSANDGKWIDYVGYQYKFERVSGSELRLFDNTSSSNVSNH
SMVSLQPSIAPRKHVDLDTKFYLEVGDRVLAEYKRNGKFYSATICEILSN
SKYMVNWFDGDVNGREVRHIELNLDSIPKPDELSKDTIIFFQDEELWHPG
LITNIYNGIDGTSLYDVGTLHGAKSYEGLPIDKLSSKIEVTDTGFLMTPT
TSLPPVNPQMANNRLNVGDRVLAMWIKTKWQYFPATIRKVLPNLQYKIEW
DDQDSTGLIVDCFNLAKDVIPEAQWIGVGSIVLFQQGGYSGNNDLG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041196XLOC_041196Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00065757TCONS_00065757Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 19..42
e-value: 0.0095
score: 25.1
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 21..42
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 19..42
score: 8.995
NoneNo IPR availableGENE3D2.30.30.140coord: 57..112
e-value: 1.1E-9
score: 37.6
coord: 229..283
e-value: 9.5E-9
score: 34.6
NoneNo IPR availableGENE3D2.30.30.140coord: 709..762
e-value: 1.6E-8
score: 33.6
coord: 569..633
e-value: 2.9E-8
score: 32.8
NoneNo IPR availableGENE3D2.30.30.140coord: 391..455
e-value: 1.4E-6
score: 27.4
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..21
score: 5.0
NoneNo IPR availableCDDcd04508TUDORcoord: 576..609
e-value: 1.06152E-4
score: 39.8888
NoneNo IPR availableSUPERFAMILY63748Tudor/PWWP/MBTcoord: 572..609

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00065757-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top