Calmodulin protein (polypeptide) - C. hemisphaerica

Overview
NameCalmodulin protein
Unique NameTCONS_00065522-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length244

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00065522-protein ID=TCONS_00065522-protein|Name=Calmodulin protein|organism=Clytia hemisphaerica|type=polypeptide|length=244bp
MVKRFEGYKYEKLSIATEEQNGVIDKQPNGQNHTGLNFSLESVDELLHEN
KENSKGLWSNLFDFLTCGACCRVEVYYPRYEHFQNSVTSKQYEELKNAFI
AFDRNCDGFIDSEDLGYVMGKLGHDLSSKEVKKVFKDICKHSNGKMDFTD
FVEMMAQDKLVLTTSEQEILAAFQFLDQNHDGYITIDELLQRFHGCLSDT
EASRLMCEADANGDGKIDFNEFKHMMFNQERSISLAQSEVELYS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041059XLOC_041059Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00065522TCONS_00065522Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 94..122
e-value: 5.3E-4
score: 29.3
coord: 168..196
e-value: 0.0056
score: 25.9
coord: 130..158
e-value: 7.4
score: 10.7
coord: 201..229
e-value: 5.9E-6
score: 35.8
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 93..155
e-value: 2.3E-10
score: 40.7
coord: 167..226
e-value: 1.0E-11
score: 45.0
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 204..232
score: 10.469
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 126..161
score: 7.512
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 164..199
score: 13.258
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 90..125
score: 14.179
IPR002048EF-hand domainCDDcd00051EFhcoord: 94..156
e-value: 6.13745E-12
score: 57.5577
IPR002048EF-hand domainCDDcd00051EFhcoord: 168..226
e-value: 2.7348E-13
score: 61.4097
NoneNo IPR availableGENE3D1.10.238.10coord: 212..241
e-value: 1.7E-5
score: 24.0
coord: 144..181
e-value: 2.6E-12
score: 45.9
NoneNo IPR availableGENE3D1.10.238.10coord: 82..120
e-value: 2.5E-10
score: 39.6
NoneNo IPR availableGENE3D1.10.238.10coord: 182..211
e-value: 1.4E-14
score: 53.5
NoneNo IPR availableGENE3D1.10.238.10coord: 121..143
e-value: 5.3E-10
score: 38.8
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 210..222
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 177..189
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 103..115
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 85..230

Blast
[Close]
BLAST of Calmodulin protein vs. Swiss-Prot (Human)
Match: CALM3 (Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.087e-25
Identity = 53/145 (36.55%), Postives = 88/145 (60.69%), Query Frame = 0 
Query:   85 NSVTSKQYEELKNAFIAFDRNCDGFIDSEDLGYVMGKLGHDLSSKEVKKVFKDICKHSNGKMDFTDFVEMMAQDKLVLTTSEQEILAAFQFLDQNHDGYITIDEL---LQRFHGCLSDTEASRLMCEADANGDGKIDFNEFKHMM 226
            + +T +Q  E K AF  FD++ DG I +++LG VM  LG + +  E++ +  ++    NG +DF +F+ MMA+ K+  T SE+EI  AF+  D++ +GYI+  EL   +      L+D E   ++ EAD +GDG++++ EF  MM
Sbjct:    3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR-KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
The following BLAST results are available for this feature:
BLAST of Calmodulin protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CALM31.087e-2536.55Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1[more]
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