TCONS_00065378-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00065378-protein
Unique Name	TCONS_00065378-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	575

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00065378-protein ID=TCONS_00065378-protein|Name=TCONS_00065378-protein|organism=Clytia hemisphaerica|type=polypeptide|length=575bp
MKXQSTSSTKESKKKSKENLNKDTEDSTLDDKNENNNLINNKDKKKSKKD
KSNTSNRQPVSFKTKYFPWIVCATSFVVQFFVLGFYKAFGPVYVKLLQEE
PEGYGGSPVATSWVASLSISTSYLSTPLSFEIIRRIKFRPAMLIGATLSG
LGLLVSSFADSVYILYVTFGLLFGFGSSLCYSCSLLILPRYHTTYWALAH
GIALAGNGLGGMGLSPANGMLLDSVGIKKGFRIMAAVSFGVLFTCGLVYE
TPPEKDPAEEENEEDDEEDLESLNEEDEEKLLEEEVFYHDTIWKNKPLLI
FLLSTYCLNFGYYVPYVHLVKLSLDEGVSKSQADLLPGLLSLAQSVGKVF
IGKVFSYPSVNRIRAYQLSLVALCIATTFVPVLSKSYPGLLVYAIAFGFS
DGCGQATNMIIIGDLAGKELLPKAYSTFLVCSASAFVVGPPIAGAVYTAT
GDYSIAFFMCGAMAFGSAVLLFPVTCIRDEEQFKYRAKRRKERAEAKKLR
EERKKMGLPEEEAPSTPKDHLSADKMKKIRQSQVSLLTRSWHSIDFKQHK
SKSKESIRSRASRRNVDLNEVKVDA

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_040986	XLOC_040986	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00065378	TCONS_00065378	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011701	MFS
IPR020846	MFS_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 260..280
None	No IPR available	COILS	Coil	Coil	coord: 484..504
None	No IPR available	GENE3D	1.20.1250.20		coord: 42..282 e-value: 7.5E-28 score: 96.7
None	No IPR available	GENE3D	1.20.1250.20		coord: 291..504 e-value: 2.3E-26 score: 91.9
IPR011701	Major facilitator superfamily	PFAM	PF07690	MFS_1	coord: 300..492 e-value: 4.4E-19 score: 68.5
IPR020846	Major facilitator superfamily domain	CDD	cd06174	MFS	coord: 69..472 e-value: 2.29006E-26 score: 108.555
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 68..478

Blast

[Close]

BLAST of TCONS_00065378-protein vs. Swiss-Prot (Human)
Match: MOT2 (Monocarboxylate transporter 2 OS=Homo sapiens GN=SLC16A7 PE=1 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 2.249e-38
Identity = 103/440 (23.41%), Postives = 203/440 (46.14%), Query Frame = 0

Query:   69 WIVCATSFVVQFFVLGFYKAFGPVYVKLLQEEPEGYGGSPVATSWVASLSISTSYLSTPLSFEIIRRIKFRPAMLIGATLSGLGLLVSSFADSVYILYVTFGLLFGFGSSLCYSCSLLILPRYHTTYWALAHGIALAGNGLGGMGLSPANGMLLDSVGIKKGFRIMAAVSFGVLFTCGLVYETPPEKDPAEEENEEDDEEDLESLNEEDEEKLLEEEV--FYHDTIWKNKPLLIFLLSTYCLNFGYYVPYVHLVKLSLDEGVSKSQADLLPGLLSLAQSVGKVFIGKV----FSYPSVNRIRAYQLSLVALCIATTFVPVLSKSYPGLLVYAIAFGFSDGCGQATNMIIIGDLAGKELLPKAYSTFLVCSASAFVVGPPIAGAVYTATGDYSIAFFMCGAMAFGSAVLLFPVTCIRDEEQFKYRAKRRKERAEAKKLREE 502
            WIV   +F+     +GF  AF        +E  + +  +    +W++S+ ++  Y   P+S  ++ +   RP ++ G  L  LG++++SF+ SV  LY+T G + G G +     +L I+ +Y      +A+G+A+AG+ +    L+P N  L ++ G K  F I+ ++         L+    P +  ++ +N+    ED  S  +   +K   E+V  +   +++K++  LI+L     +  G++ P + L   + D+G+ +  A  L  +++      +  +G +    +  P +    ++ +    +C     +  L++ Y  L++YA+ FG   G   +     + DL G      A     +      ++GPP+AG +   TG+Y   +  CGA+   ++V L     I +   ++  AK RKE    +K RE 
Sbjct:   20 WIVVGAAFIS----IGFSYAFPKAVTVFFKEIQQIFHTTYSEIAWISSIMLAVMYAGGPVSSVLVNKYGSRPVVIAGGLLCCLGMVLASFSSSVVQLYLTMGFITGLGLAFNLQPALTIIGKYFYRKRPMANGLAMAGSPVFLSSLAPFNQYLFNTFGWKGSFLILGSLLLNACVAGSLMRPLGPNQTTSKSKNKTGKTEDDSSPKKIKTKKSTWEKVNKYLDFSLFKHRGFLIYLSGNVIMFLGFFAPIIFLAPYAKDQGIDEYSAAFLLSVMAFVDMFARPSVGLIANSKYIRPRIQYFFSFAIMFNGVC---HLLCPLAQDYTSLVLYAVFFGLGFGSVSSVLFETLMDLVGAPRFSSAVGLVTIVECGPVLLGPPLAGKLVDLTGEYKYMYMSCGAIVVAASVWLL----IGNAINYRLLAKERKEENARQKTRES 448

The following BLAST results are available for this feature:

BLAST of TCONS_00065378-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00065378-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
MOT2	2.249e-38	23.41	Monocarboxylate transporter 2 OS=Homo sapiens GN=S...	[more]

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TCONS_00065378-protein (polypeptide) - C. hemisphaerica